| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3542 |
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| Symbol | |
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| ID | 7972168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3737515 |
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| End bp | 3737988 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794127 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_002945425 |
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| Protein GI | 239816515 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1051] ADP-ribose pyrophosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0543257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGACA GCAGCAGCGG CCGCACCAGC CCGATCCTGA AGGCCTGCGC CTGCCTGGTC
GACGCCAGGG GCCGGCTGCT GGTGTTCCGC CACCCCGGCG ACGGCAACAT GCAGCTGCCC
AAGGGCACCG TCGAGCCCGG CGAATCGCCC GAGGTGGCGG TGCGGCGCGA GCTGCTGGAG
GAATCGGGCA TCGACCACGT CGGCGAGCTG CAGCCGCTCG GCACCCTGCA GCGCGACTGC
GAAGCCGGCA TCGAAGGCAA TACGCTGCGC CACCCCCAGC TGTGGCACCT GTTCCTGATG
CGCGCCGATG GTCCGCTGCC CGAAACCTTC GACCACGTGG CCATGGGCAG CCCCGAGGAA
GACGGCCTGG TGTTCTCGTT CAGCTGGCTC GCGGGCGGCG ACGACATCAG CAGCTTCACC
CTGCCCTACC GGCAGGCCAT CGAGCGCGTG CGCGCGGCCC TGCTCGCAGC GTAG
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| Protein sequence | MNDSSSGRTS PILKACACLV DARGRLLVFR HPGDGNMQLP KGTVEPGESP EVAVRRELLE
ESGIDHVGEL QPLGTLQRDC EAGIEGNTLR HPQLWHLFLM RADGPLPETF DHVAMGSPEE
DGLVFSFSWL AGGDDISSFT LPYRQAIERV RAALLAA
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