| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3532 |
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| Symbol | |
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| ID | 7972158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3727749 |
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| End bp | 3728555 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794117 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_002945415 |
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| Protein GI | 239816505 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.607966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG CCACTTCTTC ATCCACCGCC GGCAGCTGCA CGCTGGTGGG CGCCGGCCCC
GGCGACCCCG AACTGCTGAC CCTCAAGGCC GTCAAGGCGA TCCAGGCCGC CACGGTGCTG
CTGGTGGACG ACCTCGTGAG CGACAGCATC CTGGCCTCGT ATGCGCGGCC CGATGCGCGC
ATCGTGCACG TGGGCAAGCG CGGCGGCTGC AAGAGCACGC CGCAGGCCTT CATCGAGCGG
CTCATGATCA CCGCGGTGCG CGAAGGCGAG ACCGTGGTCC GGCTCAAGGG CGGCGACCCC
TTCATCTTCG GCCGCGGCGG CGAAGAGGTC GAGCACCTGC GCGAAGCCGG CATCGAATGC
ACGGTGGTCA ACGGCATCAC GGCCGGCCTC GCGGCCGTCA CCTCGCTGGG CGTGCCGCTC
ACGCACCGCG ACCATGCGCA GGGCGTGGTG TTCGTCACGG GCCATGCCAA GACCGGCGCC
GGCGCGGCCG AAGACCCGAC CGACTGGCGC GCCCTGGCCG CCACCGCGCA CAGCGCGCGG
CTCACGCTCG TGATCTACAT GGGCGTGGCG GGCGCCGGCC ACATCGAACG CGAACTGCTG
CACGGCCTGC CCGGCGACAC GCCCGTGGCC GTGGTGCAGC ACGCGAGCTT GCCGCACCAG
CGCCACGTGG CGACCACGCT CGGCAAGCTG CAGGCCGGCA TTGCCGAAGC CGGCATCGCG
AGCCCCGCGG TGATCGTGGT GGGCGACGTG CTGCGCGGAC TGGCCGCGGC GACGCTGCCG
GCCGACGCGA ACCGCTTCGG CACCTAG
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| Protein sequence | MNKATSSSTA GSCTLVGAGP GDPELLTLKA VKAIQAATVL LVDDLVSDSI LASYARPDAR
IVHVGKRGGC KSTPQAFIER LMITAVREGE TVVRLKGGDP FIFGRGGEEV EHLREAGIEC
TVVNGITAGL AAVTSLGVPL THRDHAQGVV FVTGHAKTGA GAAEDPTDWR ALAATAHSAR
LTLVIYMGVA GAGHIERELL HGLPGDTPVA VVQHASLPHQ RHVATTLGKL QAGIAEAGIA
SPAVIVVGDV LRGLAAATLP ADANRFGT
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