| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3516 |
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| Symbol | |
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| ID | 7972142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3706814 |
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| End bp | 3707971 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794101 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_002945399 |
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| Protein GI | 239816489 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGAAG CCATCCACAA CCTCGAAGCC TCCAAGATCC GCGAGGTTGC CAACGCCGGC
CTCGGCCGCG ACGACGTGCT CGCCTTCTGG TTCGGCGAAA GCGACGAGGT CACGCCCGAG
GTGATCCGCC AGGCCGCCAT CGACTCGCTG CAGCGCGGCG AGACCTTCTA TGCGCACAAC
CTCGGCCTGC CCGAATTGCG CGAGGCCATC GCGCGCTACA CCAGCGCGCT GCATCCCGCG
GTCGATGCGT CGCGCATCGC GGTCACGTCC GGCGGCGTCA GCGCGCTGAT GCTCGCGGTC
CAGGCGCTGG TCGATGCGGG CGACGAAGTG GTCGCGGTCA CGCCCGTGTG GCCCAACCTC
ACGGCGCAGC CCGCGATCCT CGGCGCCCAG GTGCGCACGG TGCCGCTGGT GCCCGCCGAC
GGCCAATGGA CGCTCGACCT GGCCGCGCTG CGCAAGGCCG TCACGCCAAA GACCAGGCTG
CTGATCGTCA ACGCGCCCAA CAACCCCACC GGCTGGACCA TGACGCGCGA AGAGCAGCAG
GCCGTGCTCG ACCACTGCCG CGAGACCGGC ACCTGGATCC TGGCCGACGA GGTGTACGAG
CGGCTGTATT TCGAGCCCAC CCCGAACAGC TGCGCGCCGA GCTTCCTCGA CATTTCCAGG
CCCGACGACC GGCTGGTGGT GACGCACAGC TTCTCCAAGA GCTTCCTCAT GACCGGCTGG
CGCCTCGGCT GGCTCGTGCT TCCGCCCGCG CTGGTCGACG GCATCGGCAA GCTGATCGAG
TTCAACACCT CCTGCGCCAG CGTCTTCACC CAGCGCGCCG CCGTTGCCGC CATCGAGCAC
ACCGCGGAGA TCACACCCCG CGTGGTGGCC CACCTGAAGC AGTGCCGCGA CACCCTGGTG
CCCCTGCTGG CCGCGCTGCC CGGCGTGCAG GTAGCCCCCG CCAAGGGCGG CATGTACGCC
TTCTTCCGCC TCGAAGGCTT CGGCGACTCC CTCGACCTCG CCAAGCGCCT GGTCGTCGAA
GCCGGCCTCG GCCTGGCCCC CGGCAATGCC TTCGCCCCCG AAGCCCAGGG CTGGCTGCGC
TGGTGCTTCG CCTCCAAGGA CCCGCAGCGG CTGGTCCAAG GTGTGGAGCG CCTCAAAACC
TGGCTATCCA AACAGTAG
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| Protein sequence | MREAIHNLEA SKIREVANAG LGRDDVLAFW FGESDEVTPE VIRQAAIDSL QRGETFYAHN
LGLPELREAI ARYTSALHPA VDASRIAVTS GGVSALMLAV QALVDAGDEV VAVTPVWPNL
TAQPAILGAQ VRTVPLVPAD GQWTLDLAAL RKAVTPKTRL LIVNAPNNPT GWTMTREEQQ
AVLDHCRETG TWILADEVYE RLYFEPTPNS CAPSFLDISR PDDRLVVTHS FSKSFLMTGW
RLGWLVLPPA LVDGIGKLIE FNTSCASVFT QRAAVAAIEH TAEITPRVVA HLKQCRDTLV
PLLAALPGVQ VAPAKGGMYA FFRLEGFGDS LDLAKRLVVE AGLGLAPGNA FAPEAQGWLR
WCFASKDPQR LVQGVERLKT WLSKQ
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