| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3487 |
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| Symbol | |
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| ID | 7972112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3676110 |
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| End bp | 3676880 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794071 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945370 |
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| Protein GI | 239816460 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.170607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG TCATCCTCGA AACACGCCAG CTCACCAAGG AATTCAAGGG GTTCACTGCG
GTCAGCAAGG TCGATCTCTC GGTGGTGCGC GGCTCGATCC ATGCGTTGAT CGGCCCGAAC
GGCGCCGGCA AGACCACCTG CTTCAACCTG CTCACCAAGT TTCTCGAACC CACCAGCGGC
ACGATCCTGT TCAACGGGCA GGACATCACG GGCGAGCGGC CGGCGCAGAT CGCGCGGCGC
GGCATCATCC GCTCGTTCCA GATATCGGCG GTGTTTCCGC ACCTCACGCT GCTGGAGAAC
GTGCGCCTCG GACTGCAGCG CGCGCTCGGC ACCTCGTACC ACTTCTGGAA GAGCGAGAAG
ACGCTCGAGC CGCTCGACGC ACGCGCCCGC GAACTGCTGG CCGAGGTCGG CCTCGCGCAC
GAAGCCGACG AACTCACGGT GAACCTGCCC TACGGCCACA AGCGCGCGCT CGAGATCGCG
ACCACGCTGG CCATGGACCC CGAGCTGATG CTGCTCGACG AACCCACGCA GGGCATGGGC
CATGAAGACG TGCACCGCGT GGCCGAACTC ATCAAGCGCG TGTCGGCCGG CCGCACCATC
CTGATGGTCG AGCACAACAT GAGCGTGGTC TCGACCATTG CCGACACCAT CACGGTGCTG
CAGCGCGGTG CCGTGCTGGC CGAAGGGCCG TACGCCGAAG TCTCCAGGAA TCCGCAGGTG
ATGGAGGCCT ACATGGGCAC CACCGACGGC CAGCTGCAAG GAGCCCATTG A
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| Protein sequence | MSDVILETRQ LTKEFKGFTA VSKVDLSVVR GSIHALIGPN GAGKTTCFNL LTKFLEPTSG
TILFNGQDIT GERPAQIARR GIIRSFQISA VFPHLTLLEN VRLGLQRALG TSYHFWKSEK
TLEPLDARAR ELLAEVGLAH EADELTVNLP YGHKRALEIA TTLAMDPELM LLDEPTQGMG
HEDVHRVAEL IKRVSAGRTI LMVEHNMSVV STIADTITVL QRGAVLAEGP YAEVSRNPQV
MEAYMGTTDG QLQGAH
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