| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3482 |
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| Symbol | |
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| ID | 7972593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3670300 |
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| End bp | 3672135 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794066 |
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| Product | 5'-Nucleotidase domain protein |
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| Protein accession | YP_002945365 |
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| Protein GI | 239816455 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCAT CGTTGAAACA TCTCGCCCTG GCGGGGGTGG TCCTGGCCAC CTTGTCCGCA
TGCGGCGGAA GCAGCCATTC GAACAACGGG TTCATTCCGT TCCTCCCGCC GCCCGCACCG
GCGCCGGCAC CGCCCCCTGC GCCGGCGCCC GCCGCGCCCG GCAGCATGGA CGTGAAGCTC
ATCGCCTTCA ACGACCTGCA CGGCAACCTC GAGCCGCCCC GGCTTTCCAT CACCGCCCCG
GCGAACGGCG GCGGCACGGT GCCGGTGCCC GCCGGCGGCG CCGCCTACCT CGCTTCGGCC
ATCGCGTCGC TCAAGGCGAA GAACGAGAAC AACGCCGTGG TCTCGGCCGG CGACATGATC
GGCGCCTCGC CGCTGGTGTC GGCGCTGTTC CTCGACGAGC CGACCATCGA GGCCGTGAAC
GCGATGAAGA TCGACTTCAA TGCGGTCGGC AACCACGAGT TCGACAAGGG CCAGACGGAG
CTCCTGCGCA TGAAGAACGG CGGCTGCGCC AAGAACACGC CGCTGGAGCC CTGCCGCGTG
AACAAGGCCT TCCCGGGTGC CAACTTCGGC TTCCTGGCGG CCAACACGGT GAAGACCGAC
GGCACCACGC TGTTCCCCGC CACGGGCATC AAGAGCTTCA CCAAGGACGG CGCCACGGTG
AAGGTCGCGT TCATCGGCAT GACGCTCAAG GGCACGCCCA GCATCGTGAC GCCGGCCGGC
GTCGCGGGCC TGAGCTTCAA GGACGAGGCC GACACGGCCA ACGCGCTGAT CCCGCAGCTG
AAGGCCCAGG GCGCCGACGC CATCGTGGTG GTGGTCCACG AAGGCGGCAC CACCACCGTG
GGGTACAACG ACAAGAGCTG CGCCGGCCTG AACGGCGACA TCCTGCCGAT CCTCGACAAG
CTCGACGCCT CCGTCGACGT GGTGATCTCG GGCCACACGC ACCGCTCCTA CACCTGCGAC
TACGGCAAGA CCAACCCGGC CAAGCCCTTC CTTTTGACCA GCGCCGGCCA GTACGGCACC
CTGCTGACCG ACATCAACCT GACGATCGAC ACGCGCACCC GCAAGGTCAC GGCCAAGTCG
GCCGACAACG TGATCGTCCA GGGCGAGGCC TACACCAGCG GCGCAACCAC GGTGGCGCTG
ACGGACCAGT ACCCCGTGTT CGGCAAGAAC CAGGAAGTGG CCGCGCTCGT CAGCCAGTAC
CTGTCCGTCG CGGCGCCGCT GGTGCAGCGG GTGGTGGGCA CGCTCTCCGG CCCGGCCACG
CGCACGCAGG CGGCCTCGCG CGAAAGCGTG CTGGGCAACC TGATCGCCGA TGCGCAGCTC
GCCGCCACCA GCGCCAGCAA CAAGGGCGGC GCGCAGATCG CGTTCATGAA TCCGGGCGGC
GTGCGCGCCG ACCTGGTGCC CGCCGGCGAC GGCAGCGTGA CCTATGGCCA GATCTTCAGC
GTGCAGCCCT TCGGCAACAG CCTGGTGGTG AAGACGATGA CCGGCGCGCA GATCAGGGCC
TTGCTCGAGC AGCAGTTCAA CAGCGGCAGC AACACGGTCG CCTCGCCGAG GGTGCTGCTG
CCTTCGCGCA GCCTGAGCTA CAGCTACAGC CTCTCGGCGC CCGCGGGCTC GCGCATCAGC
AACATGGCGC TCAACGGAAC CGCCATGACC GACGGCGCGA GCTACCGCGT GACGATGAAC
AGCTTCCTGG CCACCGGCGG CGACAACTTC ACGGTCTTCA ACCAGGGCAC CGACACGCTC
GGCGGCGACC AGGACGTGGA CGCCCTCGAG GCCTACATCA AGGCGAACAG CCCGCTCGCG
CCGCCCGCGG CCAACCGCAT CACGGCGCTG CCCTGA
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| Protein sequence | MHASLKHLAL AGVVLATLSA CGGSSHSNNG FIPFLPPPAP APAPPPAPAP AAPGSMDVKL
IAFNDLHGNL EPPRLSITAP ANGGGTVPVP AGGAAYLASA IASLKAKNEN NAVVSAGDMI
GASPLVSALF LDEPTIEAVN AMKIDFNAVG NHEFDKGQTE LLRMKNGGCA KNTPLEPCRV
NKAFPGANFG FLAANTVKTD GTTLFPATGI KSFTKDGATV KVAFIGMTLK GTPSIVTPAG
VAGLSFKDEA DTANALIPQL KAQGADAIVV VVHEGGTTTV GYNDKSCAGL NGDILPILDK
LDASVDVVIS GHTHRSYTCD YGKTNPAKPF LLTSAGQYGT LLTDINLTID TRTRKVTAKS
ADNVIVQGEA YTSGATTVAL TDQYPVFGKN QEVAALVSQY LSVAAPLVQR VVGTLSGPAT
RTQAASRESV LGNLIADAQL AATSASNKGG AQIAFMNPGG VRADLVPAGD GSVTYGQIFS
VQPFGNSLVV KTMTGAQIRA LLEQQFNSGS NTVASPRVLL PSRSLSYSYS LSAPAGSRIS
NMALNGTAMT DGASYRVTMN SFLATGGDNF TVFNQGTDTL GGDQDVDALE AYIKANSPLA
PPAANRITAL P
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