| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3478 |
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| Symbol | |
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| ID | 7972589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3664862 |
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| End bp | 3667405 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794062 |
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| Product | peptidase S45 penicillin amidase |
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| Protein accession | YP_002945361 |
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| Protein GI | 239816451 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2366] Protein related to penicillin acylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACAA GACACCTGCG CCCCACGTCG CGGCGTTCGT CAGGTCAAAG GCATTCCATT
GGCGCCACGG CGCTCGCGGC CCTGGTGCTC GCGGGCTGCG CATCCGGGCG GCCCGATGTG
CAGACGCCGC CGCGCGCGCC GACGTCCTTC GCGGTGCCCG GCCTGGAGAA GCCGGCGGAG
GTGCTGATCG ACCGCTGGGG CGTGCCGCAT CTCTACGCCG GCACGCTCTA CGACGCCTTC
GTTGCGCAGG GCTTCATTGC CGCGCGCGAC CGGCTCTGGC AGATGGACCT CTGGCGCAAG
CGCGGCCTTG GCGAGATGGC CAAGGACTTC GGCCCCGCCT GGGTCGAGAG CGACCGCGCC
GCGCGCGCCG TGCTCTACCG CGGCGACATG TACCGCGAAT GGCTGGCCTA CGGCTCCGAT
GCCAAGCGCG TGGCCGAGGC CTTCACGGCC GGCGTCAACG CCTATGTGGC GCAGGTGCGT
GCGCAGCCGG CGCTGCTGCC GAAGGAGTTC GCGCTGCTGG GCTACCAGCC GTCGACCTGG
TCGGCCGAGG ACGTGGTGCG CATCCGCCAT CACGGCCTCA CGCTCAACTT CACGTCCGAG
ATCGACCGGG CGCGCGCCTT CTGTGCCGGC GGCCAGGGCA TCAAGGCCGA CTGGCTGCGC
CGCGAGCTCG ATCCACCGGT CACGCCCAAG GTGCCCGTGG GGTTCGACCC CTGCACCCTG
CCGGCGGCCG AACTGCGCGC GGCCTACCTG CGCGCCACCG AGCCGCCGCG CTTCACCAAG
GACAACACAC GGCTTGCCGG GGCGGCGACC GCGTCCGCGC TCCTGCAGCC CGGCAGCGCC
GAAGCTGCAG CACGCAGTGC CGAGGAGGAG AAAGAGCGGC AGCAGGCACT GCAAGGCGAT
CCGACGGCCG CCTATGGCAG CAACAACTGG GTCATCGCGC CGAAGCTCAC CGCCACCGGG
CGCCCGATCC TTGCCAACGA TCCGCACCGC GCCCACGGCG CGCCGAGCCT GCGCTACATG
GCGCATCTCA GCGCGCCCGG CATGGACGCC ATCGGCGCCG GCGAACCCTT CCTGCCGGGC
CTCTCGATCG GCCACAACGG CACCATCGCC TTCGGTCTCA CGCGCTTCTA CATGGACCAG
GAAGACCTGT ACGTGTACCA GCTCAATCCC CGGAACCCGA ACGAGTACCG CTACCAGGGC
CGATGGGAGC CGATGACCCG CGTCACCGAG CGCATTGCCG TGCGCGGCGA GAGCGCGCCG
CGCGAGGTGG TCAACACCTT CACGCGGCAC GGCCCGGTGC TGCTGTCCGA GCCTGGCAAG
CGGCGCGCAT TCGCGCTGCG CGCCGCATGG CTCGAGCCCG GCATGGCGCC GTACTTCGGT
TCGATGGACT ACATGCGCGC GCAGAACTGG GACCAGTTCC GCGCCGCCAT GAACCGCTGG
GGCGCACCCG GCGAGAACCA GGTCTATGCC GACCGCAACG GCAACGTCGG CTGGATACCG
GGCGGCCTCA CGCCGATCCG CCCCAACTGG GACGGCCTCA TGCCGGTGCC GGGCGATGGC
CGCTACGAGT GGTCGGGCTT TCGCAACGGC GACGAACTGC CCTCGGAGTT CAACCCTGCG
CGCGGCTATG TCGTGACCGC GAACGAGAAC AACATCCCGC CCGATCATCC GGCCGCGAAG
AAGGGCATCG GCTACGAATG GAGCGACGGT GCGCGTGCGC GCCGCCTCAA GGAGCTGTTC
GAGAGAAAGG CCGCCTCGGG TTCGCGCTTC ACGCTCGAGG ATTCGGAGCG CATGCAGAAC
GACATCGTCG CCACGCCGGC CCAGCGCCTG CTCAAGCTCC TGGCCGGCCT GCGCAGCGAC
GATGCCCGCA CGGCCGCCGG CTTGCGGCTG CTGCAAGGCT GGGACGGCAC CATGGACCGC
GACAGCGCCG CCGCTGCGCT GTACGAAGTG TGGAGCGCCA AGACGCTGCG CGCGGCGGTG
CTCAAGGCCG GTGCCGGCGA AGCCGCGGCC TCGCTGGCAG CACCCGGGGA CAACACGCGC
ATGCTGCTGC TGCTGGAGAA CCCCTTCGGC TGGATGAGCG ATGCACAGCG CGATGCGCTC
TTGCTCGAAA CCTTGCCGCC CGCGATGCAG GAGCTCACGG CCAAGCTCGG GCCCGACATG
TCGGCGTGGA AGTGGGGCGC GCTGCACCGC GCGGAGTTCC GCCATCCGCT CGGCGGCGTG
GTCGATGCGG CCACGCGCAA GAAGCTGGAA GTCGGCGACT GGCCGATGTC GGGTTCGGCG
TTCACGCCGA TGGCGGCCAG CTACCGCGCC AATGACTACA AGCTCACGTC GGGAGCTTCG
TTCCGGATGG TGCTCGACGT GGGGAATTGG GATGCCTCGC GGGCGATCAA TACGCCGGGG
CAGTCGGGGG ATCCGGACAG TCCGCACTAT CGGGATCTGG CGCCGCTCTG GCTCGAGGGG
AAGTATGTGC CGCTGGTTTA TAGCCGGGGG GCGGTGGAGA GGGAGACTGT GGAGAGGGTT
CGGTTGATGC CTTCTTTGCC TTAG
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| Protein sequence | MRTRHLRPTS RRSSGQRHSI GATALAALVL AGCASGRPDV QTPPRAPTSF AVPGLEKPAE
VLIDRWGVPH LYAGTLYDAF VAQGFIAARD RLWQMDLWRK RGLGEMAKDF GPAWVESDRA
ARAVLYRGDM YREWLAYGSD AKRVAEAFTA GVNAYVAQVR AQPALLPKEF ALLGYQPSTW
SAEDVVRIRH HGLTLNFTSE IDRARAFCAG GQGIKADWLR RELDPPVTPK VPVGFDPCTL
PAAELRAAYL RATEPPRFTK DNTRLAGAAT ASALLQPGSA EAAARSAEEE KERQQALQGD
PTAAYGSNNW VIAPKLTATG RPILANDPHR AHGAPSLRYM AHLSAPGMDA IGAGEPFLPG
LSIGHNGTIA FGLTRFYMDQ EDLYVYQLNP RNPNEYRYQG RWEPMTRVTE RIAVRGESAP
REVVNTFTRH GPVLLSEPGK RRAFALRAAW LEPGMAPYFG SMDYMRAQNW DQFRAAMNRW
GAPGENQVYA DRNGNVGWIP GGLTPIRPNW DGLMPVPGDG RYEWSGFRNG DELPSEFNPA
RGYVVTANEN NIPPDHPAAK KGIGYEWSDG ARARRLKELF ERKAASGSRF TLEDSERMQN
DIVATPAQRL LKLLAGLRSD DARTAAGLRL LQGWDGTMDR DSAAAALYEV WSAKTLRAAV
LKAGAGEAAA SLAAPGDNTR MLLLLENPFG WMSDAQRDAL LLETLPPAMQ ELTAKLGPDM
SAWKWGALHR AEFRHPLGGV VDAATRKKLE VGDWPMSGSA FTPMAASYRA NDYKLTSGAS
FRMVLDVGNW DASRAINTPG QSGDPDSPHY RDLAPLWLEG KYVPLVYSRG AVERETVERV
RLMPSLP
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