| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3462 |
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| Symbol | |
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| ID | 7972573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3646231 |
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| End bp | 3646740 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794046 |
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| Product | protein of unknown function UPF0079 |
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| Protein accession | YP_002945345 |
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| Protein GI | 239816435 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0802] Predicted ATPase or kinase |
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| TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.191362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGACG ATCACTTGCC GATTGTAGAA ACGCCGAAGA ACGCCGGCCG CACGCTGCAC
TGGCGCAGCG AAGAAGACAC CGACGCCTTC GCGCGCGCGC TGGCGGACTC GCCCGCGCTG
CGCGATGCCT TCATTGCGCT GCACGGCGAC CTCGGCGCCG GCAAGACCAC CTTCGTGCGC
CACCTGCTGC GCGCGCTCGG CATCGAGGGC CGCATCAAGA GCCCGACCTA TGCCGTGGTC
GAGCCGCACG AAGCGCCCGA CGGCCTAGCC ATCTTCCATT TCGATTTCTA CCGCTTCAAC
GATCCGCGCG AGTGGGACGA CGCCGGCTTC CGTGACATTT TCGCGGGTCC GGGCCTCAAG
CTCGCGGAGT GGCCAGAGAA CGCTGCCGGC CGCACACCAA TTGCCGACCT CGCTATTAAA
ATAGAAGCAA TGACAGACGA CACACGCAGC GTGACCCTCC TGGCGAACAC TCCCCGCGGC
AGCACCCTGC TGACGCAGCT CGGCGCATGA
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| Protein sequence | MADDHLPIVE TPKNAGRTLH WRSEEDTDAF ARALADSPAL RDAFIALHGD LGAGKTTFVR
HLLRALGIEG RIKSPTYAVV EPHEAPDGLA IFHFDFYRFN DPREWDDAGF RDIFAGPGLK
LAEWPENAAG RTPIADLAIK IEAMTDDTRS VTLLANTPRG STLLTQLGA
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