| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3460 |
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| Symbol | |
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| ID | 7972571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3644243 |
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| End bp | 3645160 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794044 |
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| Product | Auxin Efflux Carrier |
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| Protein accession | YP_002945343 |
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| Protein GI | 239816433 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.548136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAAG CGGTGAACTT CGCACAGCTG CTCTTTCCTG ATTTTTCGCT CATCGCCATC
GGCTGGCTTC TTTGCCGCTA CACGGCGCTC GACCGCCGCG TGTGGGACCA GGTCGAAAGC
CTGGTCTACT ACTTTCTATT TCCTGTGCTG CTGTTCCACT CGATCGTGCG CAGCCCGCTC
GACTTTGCCG CCACCTCGAG CCTGCTCACC GCAGGCGTGG GCATCGGCCT TTGCGGCATC
GCGATGGCCT ATGCACTGCC CTACGTGCCC GGCCTCGGTT CGCACATCGA CCGCCGCGAC
CATGCGGCCA GCGCGCAGAT CGGGTTCCGC TTCAACTCCT TCATCTGCCT GGCGCTCGCC
GAGCGGCTGG CCGGTGCGCA GGGCCTCTTG CTGATTGCGG TGCTGATCGG CGTGTGCGTG
CCGATGTTCA ACATCGCGGC CGTCTGGCCG ATGGCACGGC ATGCCGAGAG CGGCTTTGCG
CGGCAGTTGG TGCGCAATCC GCTGATCGTC GCCACGCTGG CCGGGTTGCT GGCCAACGTG
CTGGGCTTCA CCGTGCCGAA CTGGGCCACG CCCACGCTCA CGCGCATCGG CGCCGCATCG
CTTGCGCTCG GCCTGCTGGC CGCGGGCGCG GGCATGCAGT TCGCCACGCT GGGGCGCGGC
AAGGTGCTCG CGGTGTCGGT GCTGTCCATT CGCCACCTGT TCCTGCCGCT GGTGGCATGG
GGCCTGTCGC TCGCGCTGCG GCTTGACGCG ACGCAGGCCT CGGTGCTGAT GGCGTTTTCC
GCCGTGCCCA CCGCCTCCAG CGCCTATGTG CTGGCGGCGC GCATGGGCTA CAACGGACCG
TACGTGGCGG GCCTCGTGAC CCTGTCCACG CTGCTGGGCG TGCTGAGCCT GCCGTTTGCG
CTGGCGCTGC CGCGCTAG
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| Protein sequence | MLEAVNFAQL LFPDFSLIAI GWLLCRYTAL DRRVWDQVES LVYYFLFPVL LFHSIVRSPL
DFAATSSLLT AGVGIGLCGI AMAYALPYVP GLGSHIDRRD HAASAQIGFR FNSFICLALA
ERLAGAQGLL LIAVLIGVCV PMFNIAAVWP MARHAESGFA RQLVRNPLIV ATLAGLLANV
LGFTVPNWAT PTLTRIGAAS LALGLLAAGA GMQFATLGRG KVLAVSVLSI RHLFLPLVAW
GLSLALRLDA TQASVLMAFS AVPTASSAYV LAARMGYNGP YVAGLVTLST LLGVLSLPFA
LALPR
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