| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3426 |
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| Symbol | |
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| ID | 7972537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3614642 |
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| End bp | 3615763 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644794010 |
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| Product | Kelch repeat-containing protein |
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| Protein accession | YP_002945309 |
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| Protein GI | 239816399 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3055] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.261709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCGCC GAAGCTTCGT TCTCGCGACC GCCGCCTGTG CGGTGGCCGG CGCCGCGCGC
GCGCAGCACG CGGCCACGCA CGACACGCTG CCGCCGGCGC CTTCGTCGAA GGAGCCCTAT
GCGCGGCTGC AAGGCGGCGT TCCGCACCAC ATGACGCCCG AGCAGGAAGC CCAGCGCGTC
ACCGACAGCC CCGCACCGGC CGGTCCCGCG GGACGCTGGG AGCCGCGCGC GGCGCTGCCC
ATTCCGCGCA GCGAGATGGC CTGGGCCACT GCGGCGCAAG GGCGGATGCA CGTGGTCGGC
GGCTATGGCG AGGGCGCGGT CAACCGCGAC TACCACCACA TCTACGACCC CAAGGCCGAC
CGCTGGCTCG ACGGCGCACC GCTGCCGCGC GGCGCCAACC ACGTGGCGGT GGCGGCCGAC
GGCGACCGGA TCTACGCCCT GGGCGGCTTC GTCGAGCAGA ACCGCCGCTC CGACACCAAC
GCCTACGTCT ACGAGATCGC GGCGAACCGC TGGAGCGCCA TCGCACCGCT GCCACGACCG
CGCGGTGCCG CCGCCGCGGT GATGCAGGGC GGCGTGCTGC ACCTGATCGG CGGCGCCTCC
GAGCCTGCGG CCGAACGCGC GAGCGTGGGC TGGCACGAGG TCTACGACCC CAAGGCGGAC
CGCTGGTCCT CCGCCAAGCC GCTGCCCGGT GCGCGCGACC ACGTGGGCTG CGTGGCGCAC
GGCGGCCAGA TCCACGTGAT CGGCGGGCGC TTCAACACCT TCGAATACAA CACCGACCTG
CACCACGTCT ACCTGCCCGC GCGCGACACC TGGGAGCTGC GTGCGCCGCT GCCCACGGCG
CGCTCGGGCC ACGGCCTCGT GGTGTACCGC GGCCGCTTCT TCGCGATGGG CGGGGAGGGC
GGCTTCCTGG TGGGCGGCGT GCCGCGCCAG GCCAAGGTGT TCGGCCAGAT GGAAAGCTAC
GATCCCGTGG CCGACAGCTG GCAGCGCCAT GCCCCGATGC TCACGCCGCG CCATGCGGTG
GGCGCCGCGG TGATCGGCGA CTGGATCTAC GTGGCCGGCG GCGGCGCGGT GCTCGGCGGC
GCCGTGCAGT CCGCAGTGCA CGAGGCTTTC ACACTAGGCT GA
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| Protein sequence | MHRRSFVLAT AACAVAGAAR AQHAATHDTL PPAPSSKEPY ARLQGGVPHH MTPEQEAQRV
TDSPAPAGPA GRWEPRAALP IPRSEMAWAT AAQGRMHVVG GYGEGAVNRD YHHIYDPKAD
RWLDGAPLPR GANHVAVAAD GDRIYALGGF VEQNRRSDTN AYVYEIAANR WSAIAPLPRP
RGAAAAVMQG GVLHLIGGAS EPAAERASVG WHEVYDPKAD RWSSAKPLPG ARDHVGCVAH
GGQIHVIGGR FNTFEYNTDL HHVYLPARDT WELRAPLPTA RSGHGLVVYR GRFFAMGGEG
GFLVGGVPRQ AKVFGQMESY DPVADSWQRH APMLTPRHAV GAAVIGDWIY VAGGGAVLGG
AVQSAVHEAF TLG
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