| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3412 |
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| Symbol | |
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| ID | 7972523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3599934 |
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| End bp | 3600962 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793996 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_002945295 |
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| Protein GI | 239816385 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCCA GCGGCCGCGC CACCATCGCC GACGTCGCCG AGGCGGCCGG CGTTTCCAAG
GCCACCGTCT CGCGTTTTCT CAACCACCGC GAGCGCCTGC TGAGCCGCGA CATCGCGGCG
CGCGTGGAAG CGGCCATCGC CAAACTGGCC TACACGCCGA GCCCGATGGC GCAGGCGCTG
AGCCATGGGC GCTCGCGCCT CATCGGCCTG ATCGTGGCCG ACATCACCAA CCCCTATTCG
GTGGCCGTGC TGCGCGGTGC CGAGAAGGCC TGCCAGGACG CGGGCTACCT GGTGATGCTG
TTCAACCTGG GCAACGAGAG CGAACGCGAG CGCGAGGCCA TCGATGCGCT CGCGGGCTAC
CAGGTCGACG GCTTCATTCT CAACACCCTG GGCCGCGGCA GCAACGTGGT CGACGCGGTC
ACGCTGCACG GCAAGCCCGC GGTGCTGGTG GACCGCCGCC ACACCGGCAT GCACACCGAC
TTCGTCGCGC TCGACAACCA TTCGGCCATG CGCGACACCT GCGGCCACCT GGTCGAGGGC
GGCTACCGCG AACTGCTCTA CGTGACCGAG CCGCAGAAGG GCGTGAGCTC GCGGCGCGAA
CGCACGGCCG CCTTCGGTGC CTGCGTGGCC GCGCACGAGC CGCGCGTGGC GGGCGAGGTG
TTCGAAAGCG TGGAGGGCGA CGGCGATGCG CTCGACGAGG CATTGCGTGC GCTGCGCCAG
CGCGCCAAAC GGGGGCGCCG CGCGGCCGTG GTCGCGGGCA ATGCGGTGGT CACGCTGCGC
ATCGCGCAGT CGATGGCGCG GCTGGGCTGG CAGTTCGGGC AGGACCTGGG CTTCGTCGGC
TTCGACGATC CCGAATGGGC CTCGCTGATC GGCCCCGGCC TGAGCACCGT GGCGCAGCCG
ACCGACGCCA TCGGCCGCAC GGCCGCCACC TGCCTGATCG AGCGGCTGCG CGGGCTCGAT
GCCGCACCGC GCCAGCTGCT GCTGCCGGGG CAGCTGGTGG TGCGGGGCTC GTCGCAGGCA
CAGCCGTAG
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| Protein sequence | MNPSGRATIA DVAEAAGVSK ATVSRFLNHR ERLLSRDIAA RVEAAIAKLA YTPSPMAQAL
SHGRSRLIGL IVADITNPYS VAVLRGAEKA CQDAGYLVML FNLGNESERE REAIDALAGY
QVDGFILNTL GRGSNVVDAV TLHGKPAVLV DRRHTGMHTD FVALDNHSAM RDTCGHLVEG
GYRELLYVTE PQKGVSSRRE RTAAFGACVA AHEPRVAGEV FESVEGDGDA LDEALRALRQ
RAKRGRRAAV VAGNAVVTLR IAQSMARLGW QFGQDLGFVG FDDPEWASLI GPGLSTVAQP
TDAIGRTAAT CLIERLRGLD AAPRQLLLPG QLVVRGSSQA QP
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