| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3408 |
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| Symbol | |
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| ID | 7972519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3596196 |
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| End bp | 3596654 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793992 |
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| Product | Endoribonuclease L-PSP |
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| Protein accession | YP_002945291 |
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| Protein GI | 239816381 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTT ACGACAAGCT TTCCAGCCTC GGCATCACCC TGCCCCCGGT CGCTGCCCCC
GCCGCGGCCT ACGTGCCCTT CGTGCGCACC GGCAACCTCG TTTTTCTCTC GGGCCACATC
GCCAAAAAAG ACGGCAAGGT CTGGGCCGGC CAGCTCGGCG CGAACATCGG CACCGAAGAA
GGCAAGCAGG CCGCGCGCGC CATTGCCATC GACCTGCTCG GCACGCTGCA TGCGGCCGTG
GGCGACCTGA ACAAGGTCAC GCGCATCGTC AAGGTCATGA GCCTGGTCAA CTCCGTGGGC
ACGTTCACCG AACAGCACCT GGTGACCAAT GGCGCGAGCG AATTCTTCGC CGAAGTGTTC
GGCCCCGAGA AGGGCGCGCA TGCGCGCAGC GCGTTCGGCG TGGCACAGGT GCCGATGGGC
GCCTGCGTCG AGATCGAGCT GATCGCAGAA GTCGGCTGA
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| Protein sequence | MSVYDKLSSL GITLPPVAAP AAAYVPFVRT GNLVFLSGHI AKKDGKVWAG QLGANIGTEE
GKQAARAIAI DLLGTLHAAV GDLNKVTRIV KVMSLVNSVG TFTEQHLVTN GASEFFAEVF
GPEKGAHARS AFGVAQVPMG ACVEIELIAE VG
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