| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3390 |
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| Symbol | |
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| ID | 7970628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3569339 |
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| End bp | 3570271 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793974 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945273 |
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| Protein GI | 239816363 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCACT ATTCGCAGAC CGGCCAGCTC GGCAGCGTCG CCGAGCAGAT CGTCGCGCCG
CTCAGGGCCG ATCCGGGGAT TTCCGTGCAT GTCGAAACCC TGCGTCCGCT GGCGGATTTC
CCGTTCCCCT GGCCCTTCCT GGCCTTCTTC GACGCGTTCC CGGAGTCGGC CCACATGAAG
CCGCCGCCGC TGGCGCCGCT CTCGCTCACG GGTGACGAGG ATTTCGACCT GGTCATCCTG
CCCTACCAGG TGTGGTTCCT GGCGCCGTCG CAGCCGGTCG TCGCCTTTCT CAAGCATCCG
CTGGCCCGGC GCCTGCTCGC GGGCAAGCCG GTGGTCACGG TCATTGCCTG CCGCAACATG
TGGCTGCTGG CCCACGAGAA GCTCAAGGGC CTGCTCGACG CGGTGGGCGC GCGCCTGATC
GACAACGTGG TGCTCACCGA TCCCGGCCCG ACGCTCGCCA CCTTCTTCAC CACGCCGGCC
TGGCTGATCT GGGGACGCAA GCGCGGTTTC TGGGGCATGC CCGACGCGGG GCTGAGCGAT
GCGCAGATCC AGGGCGCGGG CCGTTTCGGC CGGGCGCTGC GCGAGGCGCT GCACGGCGAC
CGGGAGCGCG GATCGCAGCC GCTGCTCGCG GGCCTGGGCG CGGTGCAGGC CGATGCGCGG
CTTCTCGTGA GCGAAAAGGC CGGCACGCGC AGCTTTTTCC TCTGGGGCAA GCTGATCATG
GCGGCGGGCC GGCCCGGCGC CTGGCAGCGC AAGCCGCTGC TGCTGCTCTA CGTGGTGTTC
CTGCTCGTGC TCATTGTCAC GGTCGTGCCG GTGAGCTTGA GCCTGCAGGC GCTGCTGCGG
CCGTTGTTCA AGGGGTGGCT GACTAAAATG ACGGCGCGCT TCGAACGCCC TTCGGGCTCG
GCCACGGACC GTTCTCCCCT TTATGACGAC TGA
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| Protein sequence | MIHYSQTGQL GSVAEQIVAP LRADPGISVH VETLRPLADF PFPWPFLAFF DAFPESAHMK
PPPLAPLSLT GDEDFDLVIL PYQVWFLAPS QPVVAFLKHP LARRLLAGKP VVTVIACRNM
WLLAHEKLKG LLDAVGARLI DNVVLTDPGP TLATFFTTPA WLIWGRKRGF WGMPDAGLSD
AQIQGAGRFG RALREALHGD RERGSQPLLA GLGAVQADAR LLVSEKAGTR SFFLWGKLIM
AAGRPGAWQR KPLLLLYVVF LLVLIVTVVP VSLSLQALLR PLFKGWLTKM TARFERPSGS
ATDRSPLYDD
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