| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3363 |
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| Symbol | |
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| ID | 7970601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3540782 |
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| End bp | 3541204 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644793947 |
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| Product | Cupin 2 conserved barrel domain protein |
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| Protein accession | YP_002945246 |
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| Protein GI | 239816336 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGGACC GAACCGCCAC CCAGTTCTCC CACGTCAAGC CCGGCGACAC CGAGTACGTC
TCGGGCGGCC TGCGCGATTT CTTCCTTTAC CGCGACCTTG GCATTGCCGA GGCCACCAAC
GGCAAGGTCA TCGCGCACCT CGTCAAGGCC AACATGGCAC CGGAAACGGG CACCGGCTGG
CACCGCCACG AGGCCGACTT CCAGATCGTG ATCATGCTCA AGGGCTGGGC CCGCTTCATG
TACGAGGACA AGGAAACGCG GGTCGAGGCC GGCGACGTGG TGCACCAGCG GCCGGGCATC
CGGCACTTCC TGTTCGACTA CTCGCCCGAC ATGGAATACC TGGAGATCGT CTCGCCGGCC
GACTTCAAGA GCATCGACGT CGAGCCGGTG TGCGAGATTC CGCCGCCGAC GCCGTGGGTC
TAG
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| Protein sequence | MLDRTATQFS HVKPGDTEYV SGGLRDFFLY RDLGIAEATN GKVIAHLVKA NMAPETGTGW
HRHEADFQIV IMLKGWARFM YEDKETRVEA GDVVHQRPGI RHFLFDYSPD MEYLEIVSPA
DFKSIDVEPV CEIPPPTPWV
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