| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3344 |
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| Symbol | |
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| ID | 7970582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3523492 |
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| End bp | 3524583 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793929 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002945228 |
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| Protein GI | 239816318 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.666045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTT CGATCAAATC CACCGCCCTG GAGCCCGACA AGTCGCTCGA CGGCGAGGCC
GTTTCCTTCG CGCAGCGCAT CGGCCGCGCA ATGCCGGTCT ATGGCCTCGT GGCGCTGATG
GCGGGCCTCG CCCTGCTGTT CTCGCTGCTG CTGCCCGACA CCTTTCCAAC GCTGTTCAAC
CTGCGCGCGA TCCTGGCCGA CAAGTCGGTG ATCGCGCTGC TGGCGCTCGC CGCGACCATC
CCGATGATCA CCGGCAAGAT CGACCTCACG GTGGGCTACG GCATCGTGCT GTGGCACATC
CTCGCGATCA GCCTGCAGAC GCAGTTCGGC TTGCCGTGGC CGGCCGCGGT GCTCATCGTG
TTGCTGTGCG CGGCCTTGTT CGGCGTGCTC AACGGCCTCC TGGTCGAGCT TGCGCAGATC
GACTCCTTCA TTGCCACGCT GGGCACCGGC ACCGTGATCT ATGCGGTCGC GATGTGGCAC
AGCGGCGGAC GCCAGGTGGT GGGCGACCTG CCCGATGGCT TCGTCGGCAT CGCGGGCGGC
AGCCTGCTGG GCCTGCCCGT CGGCGCCTTC TACGTGCTCG CGGTGAGCGT CACGCTCTGG
GTCGTTACCG AGTTCACGCC GCTGGGCCGC GCGCTGTACG TGATCGGCGC CAACCCGAAG
GCGGCGCAGC TCAACGGCAT CGCGGTGCGC AAGCATGTGA TGGGTGCCTT CGTCGCATCG
GGCCTGCTCT CGGGCTTTGC GGGCGTGCTG CTCGCCTCGC GCCTGCAGAT CGGCCAGGCC
AGCGTGGGGC TGGAGTTTTT GCTGCCTGCG CTGGTCGGCG CCTTCCTCGG CTCCACCACC
ATCCGGCCGG GCCGCGTGAA CGTGTGGGGC ACGCTGGTGG GCGTGGCGAT CCTGGCCATC
GGCATCTCGG GCATCCAGCA GTTCGGCGGT GCCTTCTATG TCGAGCCGCT CTTCAACGGG
CTCACGCTGC TGGTGTCCAT CGGCATCGCG GGCTGGGCGC AGCAGCGGCG CAACCGCTCG
ATCAAGCGGC GCATCGCCGA GCGCCAGCTC GACCATGCGC AACAACCGGT TCCCTCAACG
CCGTCGAAGT GA
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| Protein sequence | MSSSIKSTAL EPDKSLDGEA VSFAQRIGRA MPVYGLVALM AGLALLFSLL LPDTFPTLFN
LRAILADKSV IALLALAATI PMITGKIDLT VGYGIVLWHI LAISLQTQFG LPWPAAVLIV
LLCAALFGVL NGLLVELAQI DSFIATLGTG TVIYAVAMWH SGGRQVVGDL PDGFVGIAGG
SLLGLPVGAF YVLAVSVTLW VVTEFTPLGR ALYVIGANPK AAQLNGIAVR KHVMGAFVAS
GLLSGFAGVL LASRLQIGQA SVGLEFLLPA LVGAFLGSTT IRPGRVNVWG TLVGVAILAI
GISGIQQFGG AFYVEPLFNG LTLLVSIGIA GWAQQRRNRS IKRRIAERQL DHAQQPVPST
PSK
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