| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3334 |
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| Symbol | |
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| ID | 7970572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3513840 |
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| End bp | 3514859 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644793919 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945218 |
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| Protein GI | 239816308 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.643163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATCC CCTCTGCTAC CCGCCGCCAT GCGCTTCGCG CACTGTCGGC ATTGCTGCTG
CCCGGAAGTC TTCGCGCCAC TGCGGCCTCG GCCAACGATC CGTCCGAGGC CGCGGCGGAC
TGCATCATTC CCGCCAAGGC CGGCGGCGGC TTCGACCTCA CCTGCGCCCT CGCGCGCGAC
GCGCTGCAGG CGGTGCGCCC GAGGCGTCCG CCATTGGGCC AGCGCTACCT GCCGGGCGGC
ATCGGTGCGG TGGCCTTCGA CCGCATTGCC ACCGGCCGGC TCGGCGGACC GGGCACGCTG
GTGGCGTTCT CGAGCGGCTC GCTGCTCAAT CTTGCGCAAG GCCGCTTCGG GCCGCACCCG
CCTACGGCGG TGCGCTGGAT CGCCACGCTC GGCACCGACT ACGGCGTGAT CGCCGTTCAC
CGCGACTCCC CCTACAAGCG CCTGCCGGAC CTGATCGCCG CCCTGCGGCA GGAGCCCTCG
CGCGTGGCCT TCGGCGCGGG CGGCACGGTC GGCAGCCAGG ACTGGGTGAA GGCCGCACTG
CTGGTGCGCG CCGCGGGCCG CGACCACCGG GCCATGCGCT TCGTGTCCTT CGAAGGCGGT
GGCGATGCGC TGGGCGCGCT GCAGGGAAGG CACGTCGATG TGTTCCCGGG CGATGCAGCC
GAAGCGCTGC AGGCCATTGC GGGCGGCGCG GCGGTGCGCC TGCTGGCCGT GCTCTCGCAG
GCGCGGCTGG GCGGTGCGCT CGCCGGCGTG CCGACCGCGC GCGAGCAAGG CGTGGACATC
GTCTGGCCGA CCGTGCGCGG CCTGTACCTG AGCGCGAACG TGCCCGATGC CGCCATGCGC
GCCTGGACCG CGGCCTTCGC CGAAGCCGCG GCCGCGCCCG GCTATGCGGC GCTGCGCGAA
CGGCACGGCC TATATCCTTT CGCGCTCACC GGCGCCGCGC TCGACGACTA CGTGCAGGCG
CGCATCAAGA CCTACCAGGC GCTCGCGGAC GAACTCGGAC TGCGCCGCTG GAAGCCCTGA
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| Protein sequence | MPIPSATRRH ALRALSALLL PGSLRATAAS ANDPSEAAAD CIIPAKAGGG FDLTCALARD
ALQAVRPRRP PLGQRYLPGG IGAVAFDRIA TGRLGGPGTL VAFSSGSLLN LAQGRFGPHP
PTAVRWIATL GTDYGVIAVH RDSPYKRLPD LIAALRQEPS RVAFGAGGTV GSQDWVKAAL
LVRAAGRDHR AMRFVSFEGG GDALGALQGR HVDVFPGDAA EALQAIAGGA AVRLLAVLSQ
ARLGGALAGV PTAREQGVDI VWPTVRGLYL SANVPDAAMR AWTAAFAEAA AAPGYAALRE
RHGLYPFALT GAALDDYVQA RIKTYQALAD ELGLRRWKP
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