| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3303 |
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| Symbol | |
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| ID | 7973699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3481563 |
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| End bp | 3482510 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793888 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945187 |
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| Protein GI | 239816277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACC GAGACATCCC CGAAATTCCC GACGTGCGCG ATCCGCACGA TGCGCCCGCG
TACAGGCCGC GGCGCGAGAC CTCGACCGGA ACCATCGTCG TCATCGTGCT GCTGGCGATC
GCCGCCGGAT TCCTGGGCTG GCGCTGGTAC CAGCAGCAGC AGCAACCGCC GCTGCCGGTC
GAACCGCCGG TGGCCGCCGC CCCCAACGAC GGGCTTGCGC CCGCACCGCC GCCGCCCTCG
CTGCCCGAAT CCCCGGAGCC CCAGAACCCG ATCGACGCGA TCGCGCTGCC CGCTTCGGGG
CTGCCCAAGC TCGCCGATTC CGATACGCGC GTGATGAAGG CGCTGGTCGA CCTGATGGGC
AGCAAGAACG TGGCGGACTT CCTGCAGTTC GAAGGCATCG TGCGCCGCTT CGTGGCCACG
GTCGACAACC TCGCGCGCGA GCAGTCGCCC GCGAGCACCT GGCCGGTGCA GCCGACGAAG
CAGCGCTTCA CCACCCAGGG CAAGGGCGAG GCGCAGACCA TCGCACCCGG CAATGCCGCT
CGCTACACCC CCATCGTGCA GCTTGCCGAG TCGATCAATC CGGCCAAGGC GGCCAAGACC
TACGCCCAGC TCTATCCGCT GTTTCAGAAA GCCTATGAGG ACCTCGGCTA TCCGGGGCGC
TACTTCAATG ACCGGCTCAT CGCCGTGATC GACCATCTGC TGCAGGCGCC CGAGCCCGCC
GGCCCAGTGC CGGTTCGCCT CGTCGAGGTG AAGGGCAACG TGTCTTCGCA GCGGCCATGG
GTGCGCTACG AATACGCCGA TCCGCAGCTC GAGTCGCTCT CGTCAGGCCA GAAGATCATG
GTGCGCATGG GGCTGGAGAA CGAGCGCAGG ATGAAGGCCA GCCTGCGAGG CTTCCGCGAG
CAGATCGCCA CCGGCGAGAT GCTGAAGAAG AAGCAGCAGC AGCGCTGA
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| Protein sequence | MSDRDIPEIP DVRDPHDAPA YRPRRETSTG TIVVIVLLAI AAGFLGWRWY QQQQQPPLPV
EPPVAAAPND GLAPAPPPPS LPESPEPQNP IDAIALPASG LPKLADSDTR VMKALVDLMG
SKNVADFLQF EGIVRRFVAT VDNLAREQSP ASTWPVQPTK QRFTTQGKGE AQTIAPGNAA
RYTPIVQLAE SINPAKAAKT YAQLYPLFQK AYEDLGYPGR YFNDRLIAVI DHLLQAPEPA
GPVPVRLVEV KGNVSSQRPW VRYEYADPQL ESLSSGQKIM VRMGLENERR MKASLRGFRE
QIATGEMLKK KQQQR
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