| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3284 |
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| Symbol | |
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| ID | 7973680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3458656 |
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| End bp | 3459384 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793869 |
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| Product | PAP2 (acid phosphatase) superfamily protein |
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| Protein accession | YP_002945168 |
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| Protein GI | 239816258 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3907] PAP2 (acid phosphatase) superfamily protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0420172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGTG TCCCGAATCC TCCGAATCCC TCGAACCTTC GCCTGGGCGT GCTGACCCTC
CTTGCATTGG CGCTGCTGCT CGCGTGGGAC GCTACAGGCG GCGATCTCGC CCTGGCGCGC
CTCGCGGGCA CGCCCATGGG CTTTCCGTGG CGCGAGAACG CCTTCCTGGT GCATGTGATG
CACGAGGGCG CGAAGGACCT GAGCTGGCTG TTCGTGATCG CGCTGTTCGC CGGCATCCGC
TGGCCGCTCG GCATCCTGCG CCGGCTGCCG GTTCGCGCCC GGGCCCAATT GGCATTCACG
GTGCTGCTCT CGGTCCTCGC CGTCAGCCTG CTCAAGCATG CGAGCCACAC GAGCTGCCCC
TGGGACCTGA AGGAGTTCGG CGGTGTGGCC AGCCACGTGT CGCATTGGGC ATGGAAGGTC
TATGACGGCG GCGCGGGCGG GTGCTTCCCG GCGGGCCATG CCTCGGCGGC CTTTGCCTAC
GCCGGCGGCT ATTTCGTGCT GCGCCGGGTG TCGCCGCGTG CCGCGGTCCT CTGGCTTTGC
GCGTCGCTGG CCGCGGGACT GCTGCTCGGC CTGTCGCAGC AGCTGCGGGG CGCGCACTAC
ATGAGCCACA CGCTCTGGAC CGCCTGGATC TGCTGGGTGG CGGGCTTTGC CATCGACCTG
GTCGTCGCAC CCCGCGCTTC GCGGCTGGCC GCAACCGAAC CTGCCGCCGT GTTGCATGCA
GGGCCTTGA
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| Protein sequence | MTRVPNPPNP SNLRLGVLTL LALALLLAWD ATGGDLALAR LAGTPMGFPW RENAFLVHVM
HEGAKDLSWL FVIALFAGIR WPLGILRRLP VRARAQLAFT VLLSVLAVSL LKHASHTSCP
WDLKEFGGVA SHVSHWAWKV YDGGAGGCFP AGHASAAFAY AGGYFVLRRV SPRAAVLWLC
ASLAAGLLLG LSQQLRGAHY MSHTLWTAWI CWVAGFAIDL VVAPRASRLA ATEPAAVLHA
GP
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