| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3270 |
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| Symbol | |
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| ID | 7973666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3443092 |
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| End bp | 3444042 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793855 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945154 |
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| Protein GI | 239816244 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0353308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGC AAAAAGCTGA ATCGCTCTGG ATGCACCTGC ACTGGCTGAT CGTGCTCGGC
CAGCAGGGCA GCTACACCGC CGCCGCCGCG CGCCTGGGCG TGAGCAAGGC CGCCATGAGC
CAGCGCATTG CCGAGCTGGA GCGCGCCGTG GGCGTCACGC TGGTGCGCCG CACCACCCGC
AGCATGCGGC TGACCGAAGC CGGGCAGCAG CTGGTCGACC AGACGCGCGA GCCCTTCGAG
CAGATCGCCC ACAGCTTCCT GCAGGCGCAG GACCATGCGG GCGAGCCGCG CGGCCTGGTG
CGCGTCACCG CGCCGGTGGC GCTGGGGCGG CAGCAATTGC TGCCGAGGCT CGCCGACTTT
CTGCTGGCGC ATCCGTCGAT CCGAGTCGAA ATGGAACTCT CCGACCGGCT GAGCTCGCTG
GCGACGGAGG GCTTCGACCT GGCGGTGCGG CACGCGGCTT CGCCGCCCGA CACGCACGTG
GCCTGGCGGC TGTGCGACAC GCGCTCGGTG CTGGTCGCAA GCCGCGCCTA CCTGCGCCGC
AAGGGAACGC CGCTGGCGCC GCCCATGCTG ACCGAGCACG ACTGCCTGCA CTATCCCCGC
GGGCAGGAAA CCAACGTGTG GTCCTTCGAG CGGCGCGGCG GCCGCGCGCG CCATGCCGAG
CGCGTGACCG TGCCCATCGC CGGCCCGCTG GCGGCCAACA ACAGCGAGGC ACTGCGCGAC
GCGGCCCAGG CGGGGCTCGG CATTGCGCTC CTGCCCGACT TCAGCGCGCA GTCGGGCCTG
CAGGCGGGCA AGCTGGTCGA GGTGCTGCCC GACTGGCAGC CCACGGGCGC CTTCGCCGAC
CAGATCTACG CCATACGGCC TTATTCGCTG CACATTCCGC GTGCGGTCAA CCTGTTCGTG
AGCCATCTGC GCGAGACGCT GAAGGCGGGG TTCCCGCTGC CCGAGGCCTG A
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| Protein sequence | MDLQKAESLW MHLHWLIVLG QQGSYTAAAA RLGVSKAAMS QRIAELERAV GVTLVRRTTR
SMRLTEAGQQ LVDQTREPFE QIAHSFLQAQ DHAGEPRGLV RVTAPVALGR QQLLPRLADF
LLAHPSIRVE MELSDRLSSL ATEGFDLAVR HAASPPDTHV AWRLCDTRSV LVASRAYLRR
KGTPLAPPML TEHDCLHYPR GQETNVWSFE RRGGRARHAE RVTVPIAGPL AANNSEALRD
AAQAGLGIAL LPDFSAQSGL QAGKLVEVLP DWQPTGAFAD QIYAIRPYSL HIPRAVNLFV
SHLRETLKAG FPLPEA
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