| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3226 |
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| Symbol | |
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| ID | 7973459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3405268 |
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| End bp | 3406689 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793811 |
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| Product | GTP-binding protein HSR1-related |
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| Protein accession | YP_002945110 |
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| Protein GI | 239816200 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGC AGCAGCATCA AGCCATCCGC ATCGCCGTGG TCGGCCACAC CAATGCGGGC
AAGACCTCGC TGCTGCGCAC GCTGACGCGG CGCGCCAACT TCGGCGAGGT GTCGCAGCGG
CCCGGCACCA CGCGCCATGT CGAATCGGTC GACCTGGAGG TGAACGGCCA GGCCGCGGTG
CGCTTCTTCG ACACGCCGGG CCTGGAAGAT GCGGTGGCGC TGCGCGAGCA CCTGGCCGGC
CTCGATGGTG CGCAGGCCAC GCCGCCCGAG CGCATCCGCC TGTTCCTGCA AGGGCCCGAG
GCGCATGGCG TGTTCGAGCA GGAGGCCAAG GTGCTGCGCA CCATGCAGGA CATCGATGCG
GCCTTTCTCG TGATCGACGT GCGCGAGCCG GTGCTGCCCA AGTTCCGCGA CGAGATCGAG
CTGCTCAACT CCTGCGCGCG GCCGGTGCTG CCGGTGCTCA ACTTCGTGCG CGATGCGGCG
AGCCGCGAGC CCGACTGGAA GGAACTGCTC TCGGCCTACG GCCTGCACGT GCAGGTGCGC
TTCGATGCCG CGGCGCCTTT CGTGGGGGCC GAGCGCGAGC TCTACGGCGA CCTGTCGACA
TTGCTGCGCG ACCGGCGCGA GCAATTGCGC GCGGTGGCGG ATTGGCTCGC CGCCGAAGCC
GCCGAGCGCC GCCGCGCGGC CTGCGCGCGC ATCGCCGAAC TGCTGGTCGA TGCGGCGGCG
CTGCGCCGCA CGGTGCCGGC CGAGGAATTC GCCGACACGG CGCGCCGCAA GGCCTTCGTC
GCGGCCTTGC AGAAGGAGGT GTTCGACAAG GCGCAGCGCT GCACCGACGA CCTGCTCGCG
CTCCATGGCT TTCGCCAGGA CGATGCGGGC GAGGCACCGC TGCCGCTCAT CGAAGGCCGC
TGGACGCTGG ACTTCTTCAG CCCCGAAGCC ATGAAGGACG CGGGCCTGCG GCTCGGCAAG
GGCGCCGCCA TCGGCGCGGC CGTGGGCGTG GTGGCGGACC TGGCGGTGGC CGGCATTTCG
CTGGGCACGG GCGCGGCAGT GGGCGGCGCC ATCGGCGGTG CCGTGTCGCA GGGCTGGGGC
CCGTTCGGCC GCAAGCTGGC GAACCGGCTG CGCAACGTGC ACGAGCTCAC GGTGGAAGAC
GGCGTGCTGT TTGCGCTGGT GGCCTGGCAG CTGAAGCTCA CGCGCGCGCT GGAGCAGCGC
GGGCATGCGG CCACCGGGCG CATCGCGGCC GAAACGAGCG CGACGCAGGA CGCGCCGACG
CGCGCCACGG CCACCGCCGT GCGCGCGGTG CGGCCCGCGC GCAGCCACCC CGAATGGGAA
TCGGCGGGCC TGGCCACGCG CGGCTTCTGG CGCCCCGCGC CGCAGCGCGA CACGCTCGCG
GCCGATCTGG CGCGCACGCT GCAGGGCGCC TTCGAACCCT GA
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| Protein sequence | MTQQQHQAIR IAVVGHTNAG KTSLLRTLTR RANFGEVSQR PGTTRHVESV DLEVNGQAAV
RFFDTPGLED AVALREHLAG LDGAQATPPE RIRLFLQGPE AHGVFEQEAK VLRTMQDIDA
AFLVIDVREP VLPKFRDEIE LLNSCARPVL PVLNFVRDAA SREPDWKELL SAYGLHVQVR
FDAAAPFVGA ERELYGDLST LLRDRREQLR AVADWLAAEA AERRRAACAR IAELLVDAAA
LRRTVPAEEF ADTARRKAFV AALQKEVFDK AQRCTDDLLA LHGFRQDDAG EAPLPLIEGR
WTLDFFSPEA MKDAGLRLGK GAAIGAAVGV VADLAVAGIS LGTGAAVGGA IGGAVSQGWG
PFGRKLANRL RNVHELTVED GVLFALVAWQ LKLTRALEQR GHAATGRIAA ETSATQDAPT
RATATAVRAV RPARSHPEWE SAGLATRGFW RPAPQRDTLA ADLARTLQGA FEP
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