| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3221 |
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| Symbol | |
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| ID | 7973454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3399404 |
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| End bp | 3400189 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644793806 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_002945105 |
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| Protein GI | 239816195 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0821476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGATG GCACCGAGCC GATCTACGCG CTGTGGGACA AGCTCGCGAA CTACCCCGTC
TGCGATGGCG ATGAAGCACT CGAGCACCTG CTCTGCAGCC TCTGCTCGAT CTTCGGCGCG
CACAACGCAC TCTGGTCGGT GGTCGTGCGG CTGCCGAGCC CCGCGCTGGG CGACGCCCTG
AACGGCTGGC GTCCTCTCTT CGTCCGGCTC CTGCGGCCTT TGCCGCCGAT GGCCGCTTCG
GTCCAGGAGC AGTTCGACTC CTTGTGGTCG CCGTCCGTCG ACCTCTCGCA GATCCTTGCC
GTGGCCGGCG AGGAACCGTT CCGCACCCAG CTCCTGTTCG AAGCGCTGCC TCCCGAGTGG
TTCGGCGGTC CGCACTACCA GCGCCACTAC CTGGCCATCG GACACGCGGA CAGCATGTCG
ATGCGCTGCG CAATCAATGA CGATGTGCGG GTGCACCTTT TCATTTTCCG AAGCACGGAA
GCTCCCCGGT TCTCATCGGC GGACAAGAAT CCTTTCGGCC TGGCGCTTCG CGGGCTGCGC
TGGTTCTATC GCCAGCAATT GCTCAGCCAT GGGCTCCTCA TCGCGAACGC GCCGCTCACC
GCCACGGAGC GCAGGGTCCT GCTGGGATTG CTCGAAGGAA AGGCGGAGAA AGCGATTGCA
GCCATCCTGG GCCAAAGCCC GAATACGACG CACATCCACG TGAAGTCGAT CTATGCCAAG
TTCGGCGTCC ATAACCGGGC GGCGCTGACC TCGCTCTGGC TCGGGCGCCT GCCCGAAGCC
CGCTGA
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| Protein sequence | MHDGTEPIYA LWDKLANYPV CDGDEALEHL LCSLCSIFGA HNALWSVVVR LPSPALGDAL
NGWRPLFVRL LRPLPPMAAS VQEQFDSLWS PSVDLSQILA VAGEEPFRTQ LLFEALPPEW
FGGPHYQRHY LAIGHADSMS MRCAINDDVR VHLFIFRSTE APRFSSADKN PFGLALRGLR
WFYRQQLLSH GLLIANAPLT ATERRVLLGL LEGKAEKAIA AILGQSPNTT HIHVKSIYAK
FGVHNRAALT SLWLGRLPEA R
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