| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3217 |
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| Symbol | |
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| ID | 7973450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3396182 |
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| End bp | 3397198 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793802 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945101 |
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| Protein GI | 239816191 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.388089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCT GGCCGCACTC CTTCATCGGC CGCCGGCGCG TGGCCGCGTG GCTGGTGTTC
GCGCTCGGCG CGGCCGCGCT GCCGTGCGGC GCGCTCGCGG CCGGGCCCGC GGCCTTCCCC
GAGAAGGGCC GCAGCATCCG CATCGTGCTC GGCCTCGCGG CGGGCGGTGC CTCGGATGCA
CAGGCGCGCT TCGTCGCCAA CAAGCTCGGC GAAGTGCTGC AGACGCCGGT CATCGTGGAG
AACCGGCCGG GTGCGAGCTT CATCCTGGCC ACCGAGGAAG TGATCCGCGC CGCGCCCGAC
GGCTACACGA TGATGTACGC GCCCTCTTCC GTGGTGGCGC AGAACCCGCA GACGCTGGCG
CAGGTGCGCT ACGACCCGTT CAAGGACCTG ACGCCCATCT CGCTCGGCGC GCGCGGGCCG
CTGGTGCTCA CGGTTCATGC GAGCGTGCCC GCGCGCACGG TGCAGGAGCT GGTGGCCTAC
ATCAAGGCCA ACCCCGGCAA GATGAGCTAT GCCTCCTTCG GCACCGGCAC CTCCTCGCAC
ATCTACGGCG AGGCCTTTGC GAAGCAGGCG GGGCTGGACG TGGTGCACGT GCCCTACAAG
GGCGGCGCCG ATGCCGCGAA GGACTTTCTC GCGGGCCGCG TGCAGTACTA CTTCGACGCG
GCGCCCAATG CGATCCAGAA CACCGCCACC GGCAAGGTCC GCATGCTCGC AGTGGCGGCG
CCCAGGCGCA GCGCGATGCT GCCCGACGTA CCCACCATGA CAGAGCAGGG CGTGAGCGGG
GTCGACATGC CGAGCTGGCT CGGTTTCTAT GGGCCCGCGC GCATGCCCGC GCCGGTGGTC
GCCAAACTCA ACGCCGCGCT CGCGCAGGTG CTCGCGATGC CCGCCACGCG CGACTTCTTC
CGCCAGGGCG CCTACGAGGC CGAGTCGTCG AGCCCCGCGC AACTGGCCGA GCTCACGCGC
GCGACCTACG AGCAGTGGGG CGACATGATC CGCAAGCTGG GGCTGGCGAA GCAATAG
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| Protein sequence | MNAWPHSFIG RRRVAAWLVF ALGAAALPCG ALAAGPAAFP EKGRSIRIVL GLAAGGASDA
QARFVANKLG EVLQTPVIVE NRPGASFILA TEEVIRAAPD GYTMMYAPSS VVAQNPQTLA
QVRYDPFKDL TPISLGARGP LVLTVHASVP ARTVQELVAY IKANPGKMSY ASFGTGTSSH
IYGEAFAKQA GLDVVHVPYK GGADAAKDFL AGRVQYYFDA APNAIQNTAT GKVRMLAVAA
PRRSAMLPDV PTMTEQGVSG VDMPSWLGFY GPARMPAPVV AKLNAALAQV LAMPATRDFF
RQGAYEAESS SPAQLAELTR ATYEQWGDMI RKLGLAKQ
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