Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3213 |
Symbol | |
ID | 7973446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3391318 |
End bp | 3392613 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644793798 |
Product | protein of unknown function DUF521 |
Protein accession | YP_002945097 |
Protein GI | 239816187 |
COG category | [S] Function unknown |
COG ID | [COG1679] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCTGA GCGATGAAGA AAAAGCCATG ATGGACGGCC GCGACGGGCC GGCCGTGCAG AAGGCGATGG ACCTCCTGAT GCGCTACGGC GAAGCGCTCG GCGCCGAGCG GCTGGTGGAA ACGCGCAACG TCTGCGCCAC CATCACCTCG ACCACGCCGT TCCAGCGCGA CTTCGCGCTG GCCAAGGGCG GCGGCATGGA CGCGGTGTTC TCCGAGTTCA GCCTCGACAG CCAGGAAACC GTCGAGATCC CGAAGTTCAA GGTCTTCACG AGCCACCTGC AGCTGGGCTT CGACCCCGGC CAGCCCGAGC GCATGGGCGT GAGCGAGGAG ATCGTGCAGT TCTACAACAA GAGCGAGCGG CATGCGGCAG GCCTGGGCGC GCAGATCATG AACACCTGCA CGCCCTACCA GGTCGGCAAC ATCCCGACGC GCGGCGAGCA CTGCGCGTGG ATGGAATCGT CGGCCGTGGT GTATTGCAAT TCGGTGCTCG GTGCGCGCAC CAACACCGAA GGCCGCGAGA GCACCGGCGC CGCCATGCTC ACGGGGCGCA TTCCGTACTG GGGCTACCAC CTCGACGAGA ACCGGCATGC CACGCACGTG GTCGAGCTCG ACGTCGAAGT GGAATCGGTG CAGGACTGGG GCCTCCTGGG CTACTACATC GGCGAGCATG TGCAGGAGCG CGTGCCGGTG GTGCACAGCA AGCGCGGCAT CGCCCGCGTG CCCAACCTGC CGCGGCTCAA GCACTTCGGC GCGGCGGCAT CGTCGTCGGG CGGCGTGGAG ATGTACCACA TCGCGGGCAT CACACCCGAG GCGCTGACGC TCGAGCAGGC GCTCGGCGGC CGCGCGCCGG TGGAGGTGCT GCGCTTTGGC GAAGCCGAGC GCCGCGCCAC CTACGAGAAG ATCAACGCCA CCGGCAAGGA CGCCGAGGTG CAGTACGTGA TGCTCGGCTG CCCGCACTAC ACCATCGAGC AGATCTGGGA AGCCGCGCAG CTCATCGAGG GCCGCCGCGT GCACCCGGAT TGCGAGCTGT GGATCTTCAC GCCGCGCGCC ATCAAGTCGC TGGCCGACCG CAACGGCTAC ACGAAGATCA TCGAGGACGC CGGCGGCATC CTCATGACCG ACAGCTGCTC GGCCATGAGC CGCGCCGTGC CCAAGGGCAC GAAGACCGTG GCGCTCGATT CGGCCAAGCA GGCGCACTAC CTGCCCGCGA TCCTCGGCGT GCAGGCGTGG TTCGGCAGCA CGGCGGAGTG CATCGATGCG GCGTGCACCG GCCGCTGGAA CGGGGGAATG CAATGA
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Protein sequence | MHLSDEEKAM MDGRDGPAVQ KAMDLLMRYG EALGAERLVE TRNVCATITS TTPFQRDFAL AKGGGMDAVF SEFSLDSQET VEIPKFKVFT SHLQLGFDPG QPERMGVSEE IVQFYNKSER HAAGLGAQIM NTCTPYQVGN IPTRGEHCAW MESSAVVYCN SVLGARTNTE GRESTGAAML TGRIPYWGYH LDENRHATHV VELDVEVESV QDWGLLGYYI GEHVQERVPV VHSKRGIARV PNLPRLKHFG AAASSSGGVE MYHIAGITPE ALTLEQALGG RAPVEVLRFG EAERRATYEK INATGKDAEV QYVMLGCPHY TIEQIWEAAQ LIEGRRVHPD CELWIFTPRA IKSLADRNGY TKIIEDAGGI LMTDSCSAMS RAVPKGTKTV ALDSAKQAHY LPAILGVQAW FGSTAECIDA ACTGRWNGGM Q
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