| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3198 |
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| Symbol | |
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| ID | 7973431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3372768 |
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| End bp | 3374003 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793783 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_002945082 |
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| Protein GI | 239816172 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCC TGCTCTATTC GATGAACTTC ACACCCGAGC TCGTCGGCAT CGGCAAGTAC
TCGGGCGAGA TGGCCCAGTG GCTGCATGCC AAGGGCCACA CGGTCCGGGT GATCGCCTCG
CCGCCGTTCT TTCCGCACTG GGCGCCGTTC GAAGGGCACT CGGCCTGGGC CTACCGCAAG
ACCGACTGGA ACGGCATCAC GGTCTGGCGC GCCCCCACCT GGGTGCCGGC CAGGCCGCGC
GCGCTGGCGC GCATGCTGCA CCTGTTCTCC TTCATGCTGT CGAGCATGCC GCTGCTCTTC
GGGCAGCTGC GCTGGAAGCC GGACCTGGTC TTCGTCGTGG AGCCGCCTCT TTTCTGCGCG
CCGGCGGTGC TGTTCTTCTC GCGGATGCTG GGCATCAAGT CGTGGCTGCA CATCCAGGAC
TACGAGGTGG ACGCCGCCTT CGATCTGGGC CTGGTACGCG GCGCACGGGT GCGGCGCTTC
GCGCTCTCGG CCGAGCGGTG GCTGCTGAGC CGCTTCAGCC GGGTGTCGAC CATCTCCGCC
GCCATGCTCG ACAAGGCCAG GAACAAGGGC ATCGACGCGG CGCGGCTGGT GCTTCTTCCC
AACTGGGTGG ACGTGCGCTC GATCTACCCG CACCCCGGCA CCGCACCGGG CACGAACGGC
TATCGGGCCA TGCTCGGCAT TCCGGACGAT GCGGTCGTGG TGCTCTATGC GGGCAGCCTG
GGCAACAAGC AGGGCATCGA GGTGCTGGCC GAGGCGGCGG GCCGGCTGGC GGCCGCCAGG
CACATCCACT TCGTGCTCTG CGGCAACGGG CCGAGCCGCG AGCCGCTGAA GGCCGCCTGC
GCAGGCCTGG ACCACGTGCA CTTCCTCGAC CTGCAGCCGG CCGAGCGGCT CAACGAGCTG
CTGGGCATGG CCGACATCCA CGTGCTGCCG CAGCGCGCCG ACGCGGCCGA CCTGGTGATG
CCCTCCAAGC TGGGCGGCAT GCTCGCGAGC GGCAAGGCCG TGATCGTCAC GGCCCATGCG
GGCACCGAGC TGAGCAACGT GGTCTCCGGC CGCGGCCTGG TGGTTGCGCC CGGCGACGCC
GATGCGCTGG CCGAGGCCAT CGCGCAGCTC GCCACCTCGC GCCCGCAGCG CGAAGCCATG
GGGGCGGCCG CCCGCTCGTT CGCCGAAACC GAGCTGGACC AGAACGCCAT CCTGCAGCGC
CTGGAGCGCG AGCTGCTGCG CTGCCTTGCC GACTGA
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| Protein sequence | MKILLYSMNF TPELVGIGKY SGEMAQWLHA KGHTVRVIAS PPFFPHWAPF EGHSAWAYRK
TDWNGITVWR APTWVPARPR ALARMLHLFS FMLSSMPLLF GQLRWKPDLV FVVEPPLFCA
PAVLFFSRML GIKSWLHIQD YEVDAAFDLG LVRGARVRRF ALSAERWLLS RFSRVSTISA
AMLDKARNKG IDAARLVLLP NWVDVRSIYP HPGTAPGTNG YRAMLGIPDD AVVVLYAGSL
GNKQGIEVLA EAAGRLAAAR HIHFVLCGNG PSREPLKAAC AGLDHVHFLD LQPAERLNEL
LGMADIHVLP QRADAADLVM PSKLGGMLAS GKAVIVTAHA GTELSNVVSG RGLVVAPGDA
DALAEAIAQL ATSRPQREAM GAAARSFAET ELDQNAILQR LERELLRCLA D
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