| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3152 |
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| Symbol | |
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| ID | 7974362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3313652 |
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| End bp | 3314425 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793736 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002945036 |
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| Protein GI | 239816126 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0294751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTACC TTCGCAGCCT GCTCTTCGAA AGCGGCTCCA TCAGCTGCCA GCTGGCCACG
CTGGAGGCGG CCGAGCCGGG CTGGAGCCCG CCTTATCGCG TGCAGGGGCC GCGCCTGCTG
CTGCCGCTGA GCCAGCGCTT CGAATGCCGG CTGGGCGCGG ACGCCTTCGT CTGCGATCCC
GCGGCCGCAC TGTGGCTGTC GCCCGACGGA CCCTACCAGT TGAAGCACCC GATGGCGGGC
CAGCGCAGCG TGGTGGTCAC GCTCGTCGAA GACCTGGCGC CGGCGGGCCG GGTGTTCCTG
CCGCTGGGCG GCCAACTGCT GCTGCGCCAA TGCCTGCAGG CCCATGCGAT GCAGGCGATC
GATGCGCTCG AGGTGCAGGA GCATCTGGCC GGCCTGGTCC AGAGCGTGCG GCCGGCCGAC
CGGCCGGCGC CGCCAAAGGT CCACCGCGCG GTCGAGCGCG CCCGCGACTA CATCGCCGCG
GCACCGGAGC GCAGCGACAC GCTCGACGAA ATCGCCAAGG CGGTCCACTG CTCGGCCTTC
CACCTGGCGC GCCGCTTCCG CATGCACACG GGAACGAGCC TGCATGGCCT GCGCAACCAG
CTGCGCATGA CGCTCGCGCT CGATCGCCTG CGCGAAGGCG AGCCAAGCAT CAGCGCGCTT
GCGGCCGACC TGGGCTTTGC AAGCCATGCG CACTTCACGG TGGCCTTCCG GCGCGCCTTC
GGCATGGCGC CGAGCCAGAT GCGCACGAAT CTGGAAGCGC GCCGCCTGCA TTGA
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| Protein sequence | MTYLRSLLFE SGSISCQLAT LEAAEPGWSP PYRVQGPRLL LPLSQRFECR LGADAFVCDP
AAALWLSPDG PYQLKHPMAG QRSVVVTLVE DLAPAGRVFL PLGGQLLLRQ CLQAHAMQAI
DALEVQEHLA GLVQSVRPAD RPAPPKVHRA VERARDYIAA APERSDTLDE IAKAVHCSAF
HLARRFRMHT GTSLHGLRNQ LRMTLALDRL REGEPSISAL AADLGFASHA HFTVAFRRAF
GMAPSQMRTN LEARRLH
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