| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3109 |
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| Symbol | |
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| ID | 7974319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3269715 |
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| End bp | 3270428 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793694 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_002944994 |
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| Protein GI | 239816084 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.719582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGCGC CCGCCGGGCG GACCCCCGAT GTCTGCGAAA ATGCGCGGAT GTTCACCGGA
ATCATCACCG GCGTGGGGCG CATCGCCGCC ATCCACGACC TCGGCCCCTC CTCCTCCTAC
GGCAAAAGAC TCGGCATTGC GGTGCCCGAC GGCTACCTCG ACGACGTCGG GCTCGGCGAC
AGCATTGCGC TCAACGGCGC GTGCATGACC GTGACCACGC TCGACCCCGC CCGGCAGCAG
TTCACCATCG ACATCTCGGC CGAATCGCTC GACAAGACCG CGGGGCTGAC CGAAGAAGGC
GCCCGCATCA ACCTCGAGAA GGCGCTGCGC GCCAGCGACC GTCTCGGCGG CCACATCGTC
TCCGGCCATG TGGACGGCAT CGGCACGGTC AGCCACTTCG CGCCCGTGGG CGAAAGCTGG
GAGCTGCGCG TGGTGGCCCC GCCCGCGCTC GCGCGCTTCC TGGCGTACAA GGGCTCGATC
ACGGTCAACG GCGTGAGCCT CACGGTCAAC AGCGTGAGCG ACATCGACGG CGGCGCGGAA
ATCAGCATCA ACCTGATCCC GCACACCGTC GACAACACCT CCCTCGGCAG CCTGCAGGCC
GGCTCCAGGG TCAATCTCGA AATCGACACC GTGGCGCGCT ACGTGGAGCG CATGCTCCAG
GCCGGCGTGC TGGTGCCGAC CCCTTCCACG TATTCCAAGG ACACAGCCGA ATGA
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| Protein sequence | MRAPAGRTPD VCENARMFTG IITGVGRIAA IHDLGPSSSY GKRLGIAVPD GYLDDVGLGD
SIALNGACMT VTTLDPARQQ FTIDISAESL DKTAGLTEEG ARINLEKALR ASDRLGGHIV
SGHVDGIGTV SHFAPVGESW ELRVVAPPAL ARFLAYKGSI TVNGVSLTVN SVSDIDGGAE
ISINLIPHTV DNTSLGSLQA GSRVNLEIDT VARYVERMLQ AGVLVPTPST YSKDTAE
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