| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3107 |
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| Symbol | |
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| ID | 7974317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3267872 |
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| End bp | 3268303 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793692 |
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| Product | N-terminal methylation site |
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| Protein accession | YP_002944992 |
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| Protein GI | 239816082 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.648504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTCG TCATCGTACT GGTGGCCATC CTGCTGGCAC TGGCGCTGCC CAGCTTCAAC
AGCCTGATCG AGAAGTACCG CGTCGAGGGC ATGGCGTCGG CTCTGGTGGC GAGCGTGAGC
CATGCGCGTG CAGAGGCGGC TCGGCGCGGG CAGGCCGTGA CCATCCGGCA GCGTGCGGAG
TGCAGCGGCG CAGACTGGAG CTGCGGCTGG GAAACCGTGG TCGGCAGCGG CACCGGGTTC
GAAATCCTCC AGCGGCAAGA CCCTGACACG CGCGTTGCAA TCCAGAAAAG CGCGCTCGGA
CCCATGGCCT TCGATCCCAT GGGCCATTTT TCGAGCGTCG CCCGCATCAG CTTCCACCCG
GTTGGAAGCG CCAGTTCATC CAACGACGTC GCTGTGTGCC TGTCGCTCGG CTGGCGCGTC
AGGCGATGCT GA
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| Protein sequence | MMVVIVLVAI LLALALPSFN SLIEKYRVEG MASALVASVS HARAEAARRG QAVTIRQRAE
CSGADWSCGW ETVVGSGTGF EILQRQDPDT RVAIQKSALG PMAFDPMGHF SSVARISFHP
VGSASSSNDV AVCLSLGWRV RRC
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