| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3096 |
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| Symbol | |
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| ID | 7974306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3251717 |
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| End bp | 3254641 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793681 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944981 |
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| Protein GI | 239816071 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGCCG GCCTTTGCCG GCGCCTTCGC TTTCTCTCTT CAGACAACGA TTTCGCGCAA
GTGACCTCTA CTTCTTCCAA GCCACACGAC CTCCAGGCCC TCGACACGCT CACCGGCGGC
GCCTTCACCG CGCCAACTTC GGGCGAGCGC GCCGCGCGCA TCCGCGACTG GCTCGCAGGC
AACCCCGCGC CCGAGCAGAT GCAGGAAGTC TTCAAGGAGC TGAGCGGCCG CGACAAGGGC
GCCGCGCGCC TGCTGCGCGA AAAGCTCGAC GAACTCAAGC GCGCCAAGAG CCAGGAGACC
ATTGCCGCCG AATGGGCACA AAAGGCCGAG GCGCTGCTGG CCCAGCCCAA GCTCAACATC
GCCGATGCGC TCGCCTGGCA GCGCGACGCC GCCAAGGCCG GCGCGCCCCT CTCGCGCGAA
CCGCTCGCGG GGTTCAAGGT GCAGTTGGCC GAACGCGTCA AGGGCATCGA AGACCTGCAG
CACCGCGCCC AGGTGCACCG CGAGGCCGCC GTGCTGCTGG CCCAGCGCTT CGAGGTGCTG
TCGACCAAGG GCTGGCAGGA CGCCCAGGCC GCCGAGGAAT CGCTGCGCGC CGATGTGGCC
CACTGGCAGC AGCAGGCCGC CGACATCACG GCCGATGCCA ACTGGAACAG CCTGGATGCC
AGGTTTGCCC CGCAGCTCGA AGCGTCGAAG GCGCAGTTGC TGGTCGTCTC CGATGCGTTC
CATGCGGCAT TGGCCCAGGC GCAGGCCGCG GCCGCCGACG CTGCCGCCCC CTTGCCGCCG
GTGCCGGTGT GGGCCGATGA ACTGCGCGCC GCGCGCGGCG AAGTCGTCGC ACCCAAGGCG
GCGCCCGCCA AGCCCGCGGC GCCCAAGGTC GACCCGGCCG TGCGTGCAGC GGCGCAGGAC
GCCGTGCAGG CGGCCCTGGC CAAGCTCGAA CAGGAAACCG CCGAAGGCCA CGGCAAGGCC
AGCGCCGGCG CGGCCGCCGC ACTGCGCGCG GTGCTGAAGG AACACGGCAA GCTGGTCGAG
GCACCGCTCG AGGCGCGCGT GCATGCGGCG CTGGTCGCAG CCGGCGAGCT CGAAGGCTGG
CAGCGCTGGA GCGCCGACAA GGTGCGCGAA GACCTCGTCG CCAAGGCCGA AGGCCTGCTC
AAGCGCCCCG AAGGCCAGGC CCTTGGCGGC CGCAAGATGC AGGAAACGCT GCGCTCGCTG
CGCGACCAGT GGAAGCAGGC CGACCAGGGC GGCGTGCCGA ACCATGCGCT GTGGAAGCGC
TTCGACGAGG CCTGCAACGA AGCCCACAAG GTGGTCGAGG CCTGGCTCGA GAAGGTGCGC
GCCGATGCGG CCGAGCACCG CGCGCACCGC GTGGCGCTGA TCGAAGAAGT GCGGGCCTGG
GCGGCCGAGC ACGCCAATCC CACCGACCTG AAGGCGCACA ACCGCGCGCT GCATCAGTTT
GCCGACCGCT GGCGCGATGC CGGCCACGTG GGCGAGAAGC TCTTCGCCGA ACTGCAGCCG
CAGTGGAACG AAGCCTTCGG CGCCGCGCGC GCTCCTTTCG AGGCGGCGCA AAAGGCCAGC
ATCGAACGGC GCCAGGCCAT GATCGCGGAA GCCGCCGAGC TCGGCGCCCA GCCCATGCTG
CGCATCGATG CCGTCAAGGC GCTGCAGCAG CGCTGGCAGG CCGAGGCCCA GAGCGTGCCG
CTCGACCGCC GCCATGAGCA AAAGCTGTGG GACGCGTTCC GCGCACCCAT CGACGAAGCC
TTCAACCGCA AGACCGCCGA GCGCGAAAAG GTCTCCTCTG CAATGAGCGA GCACGACCGC
CATGTGCTCG AGGCCTCCAA GGCACTGGAC GCGGCCAATG CCGGCGGCGA CGTGCAGAAG
ATCCGCGCCG CCATCGCGCG GCTCGAAGCC GCGCTGCGCG GCGAGGCGCC TCCGCCGGCA
CCTGCCGCAA AGCCTGAGCC CTCGAGCGAC GGCCCCGCCG TGGGCGCCAC CGAAGTGGTT
GCGCCCGGAC AGGCCGCGGC CGAGTTCGGC GAGAGCGCCG AGCAGGCGCC GGGCTCGAGC
GACGCGGAAG CCCAGCCGGG CACGCACGCT CCGGCCCATG CCGCGGCCAG CCCGGACCTC
GTCGCGCCGG CCGACGGTGC CGACGCATCG GCGCGCTCCG ACGTGGCGGC ACATGACGCC
GGCGAAGCTG CCGCGGCCGA AGAAGCCAAG GCACCGCCCG CACCGCCGAA GCCCGCGCCC
AAGCCCGTGG TCGCGGTGCG CGGCGACGAC CGTCCCGGCA ACAAGAAGGC CGAGGCCGTG
CCCGCAGGCC GTGCAGGCGG CCGCTTCGGC GATCGGCGCG ACGGTGCCCG TCCGGGGCCG
GGCGGCCCTG GCCGTCCCGG CGATCGCGGC GCGGCGCGTC CCGATGGCCG TGGCGGCGAC
CGCGGTGCGC CGGCCGGACG CTTCGGCGAC CGTCCGCCGC GCTTCGAGGA CCGTGGTCCG
CGGCTCGGCG ACGCCGCTTT CCGCGCCCAG CGCGAAGCGC TCGAGCGCGC CGACCTCGCG
CTGCGCAAGC TTGCGGCGCA GGCCCACGGC GAAGCGCTCA CGCAGGTGCT CGGCGCATGG
GAACAGCGCG ATGCCTCGCG GCTGCCCAGC GTGCAGGAAC TCGGACGCGC GGTGACGCCC
GCGGTGCGCA GCGGCTGGTC CCAGGCCATC GGCACGGCGC CCAAGGCCGC GCCCGATGAA
GCTGCCGAAG CGCTGCTGCG CCTCGAAATG GCCGCCGAAG TGCCGACGCC GGCCGAGCAA
CTCGACGCAC GCCGTGCATT ACAACTCAAG CTGCTGACCA AGCGCGGCGA TCCGGCGCCG
GCCCAGACCT GGGGCCAGGA CGCCGGCAAG GTGCTGGCGG CGGCCCATGA CCCTGCGAGC
GCGCGCCGTT TGCAGAATGC ACTGAAGGCG CTGCTGCGCA AGTAG
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| Protein sequence | MCAGLCRRLR FLSSDNDFAQ VTSTSSKPHD LQALDTLTGG AFTAPTSGER AARIRDWLAG
NPAPEQMQEV FKELSGRDKG AARLLREKLD ELKRAKSQET IAAEWAQKAE ALLAQPKLNI
ADALAWQRDA AKAGAPLSRE PLAGFKVQLA ERVKGIEDLQ HRAQVHREAA VLLAQRFEVL
STKGWQDAQA AEESLRADVA HWQQQAADIT ADANWNSLDA RFAPQLEASK AQLLVVSDAF
HAALAQAQAA AADAAAPLPP VPVWADELRA ARGEVVAPKA APAKPAAPKV DPAVRAAAQD
AVQAALAKLE QETAEGHGKA SAGAAAALRA VLKEHGKLVE APLEARVHAA LVAAGELEGW
QRWSADKVRE DLVAKAEGLL KRPEGQALGG RKMQETLRSL RDQWKQADQG GVPNHALWKR
FDEACNEAHK VVEAWLEKVR ADAAEHRAHR VALIEEVRAW AAEHANPTDL KAHNRALHQF
ADRWRDAGHV GEKLFAELQP QWNEAFGAAR APFEAAQKAS IERRQAMIAE AAELGAQPML
RIDAVKALQQ RWQAEAQSVP LDRRHEQKLW DAFRAPIDEA FNRKTAEREK VSSAMSEHDR
HVLEASKALD AANAGGDVQK IRAAIARLEA ALRGEAPPPA PAAKPEPSSD GPAVGATEVV
APGQAAAEFG ESAEQAPGSS DAEAQPGTHA PAHAAASPDL VAPADGADAS ARSDVAAHDA
GEAAAAEEAK APPAPPKPAP KPVVAVRGDD RPGNKKAEAV PAGRAGGRFG DRRDGARPGP
GGPGRPGDRG AARPDGRGGD RGAPAGRFGD RPPRFEDRGP RLGDAAFRAQ REALERADLA
LRKLAAQAHG EALTQVLGAW EQRDASRLPS VQELGRAVTP AVRSGWSQAI GTAPKAAPDE
AAEALLRLEM AAEVPTPAEQ LDARRALQLK LLTKRGDPAP AQTWGQDAGK VLAAAHDPAS
ARRLQNALKA LLRK
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