Gene Vapar_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3076 
Symbol 
ID7973796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp3232081 
End bp3232734 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content66% 
IMG OID644793660 
Productflavoprotein 
Protein accessionYP_002944961 
Protein GI239816051 
COG category[C] Energy production and conversion 
COG ID[COG1036] Archaeal flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACG GGGAGCCGGC GGGCACGGGC AAGATCGATC CACGCGGCGC CGCGCTGGCG 
GCCGAAGACG GCGAAGCGCC GCTGCCGGCA TCGCCGCCGC GCTCGCGGCT GGCCTGGTGC 
GTCACGGGTT CGGGCCATTT CCTCGAGGAA TCGCTCGCGA TTGCGGCGCG GCTGCCTTCG 
GTCGACCTGT TCCTCTCGGC CGCAGCTGAA GAGGTGCTGC CGATCTACAA GCTGCAGATC 
GAGGCGCTCA GGCCGCGTTT TCGCGTGTTC CGCGACAAGA CGGCCAGCGG CGTGCCGGTG 
GGCATGCTCT ACGACGATGT CTATCACACG GTGGTGGTGG CGCCGGCCAC CAGCAATACG 
GTGGCCAAGT GCGCATTCGG CATCAGCGAC TCGCTGCCGA CGAACATGTT TGCGCAGGCC 
GGCAAGCTCG GCATTCCTGG CATCGTGTTT GCATGCGATA CGGAACCGGT GGTGGTGACC 
AAGTCGCCGC ATGACTGGGT CACGCTGCGC CCGCGGCGCA TCGAACTGGA CAACGTGGAG 
CGGCTGCGCG GCATCGACTT TTGCCAGGTG GTCTGTTCAC CGGCCCAATT GGAGACCGCG 
CTCGACACGC GCCTGAAGGA ACTTTCTCTC GCATGGAACA CATCGTCTTC CTGA
 
Protein sequence
MTNGEPAGTG KIDPRGAALA AEDGEAPLPA SPPRSRLAWC VTGSGHFLEE SLAIAARLPS 
VDLFLSAAAE EVLPIYKLQI EALRPRFRVF RDKTASGVPV GMLYDDVYHT VVVAPATSNT 
VAKCAFGISD SLPTNMFAQA GKLGIPGIVF ACDTEPVVVT KSPHDWVTLR PRRIELDNVE 
RLRGIDFCQV VCSPAQLETA LDTRLKELSL AWNTSSS