| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3042 |
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| Symbol | |
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| ID | 7973762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3202261 |
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| End bp | 3203151 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793626 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002944927 |
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| Protein GI | 239816017 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.262852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC GGCAGCGTGC TGCCAAGCCC CTTTCCATCG GCGCCCGCCT GCGGGCGGGC
CTTCTGGGCG CAGCCTGCTG CTGCGCGCTG GTTCCGGCCG CGGCCCAGGA GACCCCGCCG
CGCAAGGCGC TGCGCGTCTG CCAGGACCCC AACAACATGC CCTTCTCCAA CACCAAGGCA
GAAGGCATCG AGAACCGCAT CGCCGAGCTG TTCGGCAAGG CGCTCGGCCT GCCGGTCACC
TACTACTCGT TCCCGCAGCG GCTGGCCTTC TTCCGCAACA CGCTGCGCTT CAAGCTGCCG
GGGCAGGACT ATCCCTGCGA CATCGTGATG GGCGTGCCGG TCGGGCTCGA CGAAGTCTCG
GTCACCAAGC CCTACTACCG CTCGACCTAC GCGCTGGTCT TTCCCAAGGG CAAGGGCATG
GACAACGTGG CCTCGGCGGA AGACTTCCTC AAGCTCGACC CGGCCAAGCT CAAGTCGCTG
CGCATCGGCA TCTACGACCG CTCGCCGGCC TCGCAATGGC TCAACAAGCA CGGCCTGCTG
GAGCAAGGCG TGCCCTACAA GCTCATGAGC GCCGACCCCG CGCAGTACCC GGGCGAGATC
GTCGAGAAGG ACCTGGCCGA AGGCAAGCTC GATGCCGTGG TGGTCTGGGG CCCGATCGCG
GGCTACTTCG CGCGGCGCGT CAAGAACCCG GCCCTCGTCG TGGTGCCGCT CAAGTCCGAA
AAGGGCGTGC GCCTCGACTA CCAGATGGCC ATGGGCGTGC GCTACGGAGA GCGCGAATGG
AAGCAGCAGG TCGAAGGGCT GATCGAGTCC AAGGCACCCG AGATCCAGGC CATCCTGAAG
GAGTTCGGCG TGCCGGTGGT CGATGCATCG TTCGGGGTTC CCACCAACTG A
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| Protein sequence | MTTRQRAAKP LSIGARLRAG LLGAACCCAL VPAAAQETPP RKALRVCQDP NNMPFSNTKA
EGIENRIAEL FGKALGLPVT YYSFPQRLAF FRNTLRFKLP GQDYPCDIVM GVPVGLDEVS
VTKPYYRSTY ALVFPKGKGM DNVASAEDFL KLDPAKLKSL RIGIYDRSPA SQWLNKHGLL
EQGVPYKLMS ADPAQYPGEI VEKDLAEGKL DAVVVWGPIA GYFARRVKNP ALVVVPLKSE
KGVRLDYQMA MGVRYGEREW KQQVEGLIES KAPEIQAILK EFGVPVVDAS FGVPTN
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