Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2993 |
Symbol | |
ID | 7972269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3148982 |
End bp | 3150013 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644793578 |
Product | Fructose-bisphosphate aldolase |
Protein accession | YP_002944879 |
Protein GI | 239815969 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3588] Fructose-1,6-bisphosphate aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.689557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAC AGGCATTGAT CGACACCGCC CGGGCGCTGG TCGCCGGCGA CAAGGGCTTG CTCGCGATGG ACGAGAGCAA CGCCACCTGC CACAAGCGCT TCGCCAAACT GGGCATTCCG CAGACCGAGG ACGCGCGGCG CGACTGGCGC GAGTTGATCG TCACCGCGCC GAACCTCGGC GCGTCCATCA GCGGCGCCAT CCTCTTCGAC GAAACCATCC GCCAGCGGAC GAAATCGGGC GCGTCCTTCG TCTCGGTGCT CAGCGGCGCG GGCATCATTC CGGGCATCAA GGTCGACACC GGCGCGAAGC CGCTGGCGGG CCACCCCGGG GAGACAGTCA CCGAAGGCCT GGACGGCCTG CGCGAACGGC TGGCCGAATA TGCAGGCATG GGCGCGCGCT TCGCCAAATG GCGCGGCGTC ATCACGCCCG GCCCCGGCCT GCCCAGCCGT GCATGCATCG AGGTCAACGC CCATGCGCTG GCCCGCTACG CAGCCTTGTG CCAGGAGGCC GGGCTTGTGC CCATCGTCGA GCCCGAGGTG CTGATGGAAG GCGACCATTC CCTCGCGCGT TGCGCGGAAA TCACCGAGGA GACGCTGCAT GCGGTGTTCG CCCAGCTGCG CCTGCAGGGC GTGCTGCTCG AAGGCATGCT GCTGAAGCCC AACATGGTGC TGCCCGGGCA GGACAGCCCG AAGCAGGAGA GCGTGGAGGA AGTCGCCGAC GCCACGGTGT CGTGCCTGCG GCGCACCGTG CCCGCGGCCG TGCCGGGCGT TGCCTTCCTG TCGGGCGGGC AGTCGGCGCA GCTGGCATCG GCCCGGTTGA ATGCCATGAA TGCGAGAGCC GGTTCGCGCC TGCCGTGGGC GCTGGCGTTT TCGTATTCGC GCGCGGTCCA GCAGCCGGCG CTCGACGCCT GGAAGGGCGA CGCCGCCAAC ATTGCCGTGG CGCAGCAGGC GCTGGTGCAC CGTGCCCGCT GCAACCAGGC TGCGCGCCGC GGCGCCTACG ATGCGCGGGC CGATGCGCCG GTGCCCGGCT GA
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Protein sequence | MTAQALIDTA RALVAGDKGL LAMDESNATC HKRFAKLGIP QTEDARRDWR ELIVTAPNLG ASISGAILFD ETIRQRTKSG ASFVSVLSGA GIIPGIKVDT GAKPLAGHPG ETVTEGLDGL RERLAEYAGM GARFAKWRGV ITPGPGLPSR ACIEVNAHAL ARYAALCQEA GLVPIVEPEV LMEGDHSLAR CAEITEETLH AVFAQLRLQG VLLEGMLLKP NMVLPGQDSP KQESVEEVAD ATVSCLRRTV PAAVPGVAFL SGGQSAQLAS ARLNAMNARA GSRLPWALAF SYSRAVQQPA LDAWKGDAAN IAVAQQALVH RARCNQAARR GAYDARADAP VPG
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