Gene Vapar_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2993 
Symbol 
ID7972269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3148982 
End bp3150013 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content70% 
IMG OID644793578 
ProductFructose-bisphosphate aldolase 
Protein accessionYP_002944879 
Protein GI239815969 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3588] Fructose-1,6-bisphosphate aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.689557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCAC AGGCATTGAT CGACACCGCC CGGGCGCTGG TCGCCGGCGA CAAGGGCTTG 
CTCGCGATGG ACGAGAGCAA CGCCACCTGC CACAAGCGCT TCGCCAAACT GGGCATTCCG
CAGACCGAGG ACGCGCGGCG CGACTGGCGC GAGTTGATCG TCACCGCGCC GAACCTCGGC
GCGTCCATCA GCGGCGCCAT CCTCTTCGAC GAAACCATCC GCCAGCGGAC GAAATCGGGC
GCGTCCTTCG TCTCGGTGCT CAGCGGCGCG GGCATCATTC CGGGCATCAA GGTCGACACC
GGCGCGAAGC CGCTGGCGGG CCACCCCGGG GAGACAGTCA CCGAAGGCCT GGACGGCCTG
CGCGAACGGC TGGCCGAATA TGCAGGCATG GGCGCGCGCT TCGCCAAATG GCGCGGCGTC
ATCACGCCCG GCCCCGGCCT GCCCAGCCGT GCATGCATCG AGGTCAACGC CCATGCGCTG
GCCCGCTACG CAGCCTTGTG CCAGGAGGCC GGGCTTGTGC CCATCGTCGA GCCCGAGGTG
CTGATGGAAG GCGACCATTC CCTCGCGCGT TGCGCGGAAA TCACCGAGGA GACGCTGCAT
GCGGTGTTCG CCCAGCTGCG CCTGCAGGGC GTGCTGCTCG AAGGCATGCT GCTGAAGCCC
AACATGGTGC TGCCCGGGCA GGACAGCCCG AAGCAGGAGA GCGTGGAGGA AGTCGCCGAC
GCCACGGTGT CGTGCCTGCG GCGCACCGTG CCCGCGGCCG TGCCGGGCGT TGCCTTCCTG
TCGGGCGGGC AGTCGGCGCA GCTGGCATCG GCCCGGTTGA ATGCCATGAA TGCGAGAGCC
GGTTCGCGCC TGCCGTGGGC GCTGGCGTTT TCGTATTCGC GCGCGGTCCA GCAGCCGGCG
CTCGACGCCT GGAAGGGCGA CGCCGCCAAC ATTGCCGTGG CGCAGCAGGC GCTGGTGCAC
CGTGCCCGCT GCAACCAGGC TGCGCGCCGC GGCGCCTACG ATGCGCGGGC CGATGCGCCG
GTGCCCGGCT GA
 
Protein sequence
MTAQALIDTA RALVAGDKGL LAMDESNATC HKRFAKLGIP QTEDARRDWR ELIVTAPNLG 
ASISGAILFD ETIRQRTKSG ASFVSVLSGA GIIPGIKVDT GAKPLAGHPG ETVTEGLDGL
RERLAEYAGM GARFAKWRGV ITPGPGLPSR ACIEVNAHAL ARYAALCQEA GLVPIVEPEV
LMEGDHSLAR CAEITEETLH AVFAQLRLQG VLLEGMLLKP NMVLPGQDSP KQESVEEVAD
ATVSCLRRTV PAAVPGVAFL SGGQSAQLAS ARLNAMNARA GSRLPWALAF SYSRAVQQPA
LDAWKGDAAN IAVAQQALVH RARCNQAARR GAYDARADAP VPG