| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2992 |
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| Symbol | |
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| ID | 7972268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3148274 |
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| End bp | 3148975 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793577 |
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| Product | peptide methionine sulfoxide reductase |
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| Protein accession | YP_002944878 |
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| Protein GI | 239815968 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
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| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.356082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTCC CCGCACTCAC CGCAGGCATG CTCGCCGCCG CGGTGCTGGC CTGGCATGCC
GCACCTTCGT TCGCAGAGCC GGCCCGGCGC GTGCCGGCGG CCGCGGTCGA CCTCACGGCC
CCGCCCACCC TGAAGTACGA CACCGCCGTG TTCGCCGGCG GCTGCTTCTG GGGCGTGCAG
GGCGTGTTCC AGCGCGTCAA GGGCGTGAAC AACGCCGTGT CGGGCTACGC CGGCGGCGAC
GCCAGGACGG CGCGCTACGA GGACGTGGGC TCGGGCCGCA CCGGCCATGC CGAGGCGGTG
CGCATCACCT ACGACCCGCG GCAGATCAGC TACGGCAAGC TGCTGCAGAT CTATTTCTCG
GTGGCGCACG ACCCGACCCA GTTCAACCGG CAGGGGCCGG ACGTCGGCCC TCAGTACCGC
TCCACCGTTT TTGCCGAGAA CCTTGAACAG GCCCGCGTTG CGAAGGCCTA CATCGCGCAG
CTGAACCAGG CGAAGACCTT CAACAGGCAG TTGGCCACCA CCATCGAAAT GTCGAAGCCC
TTCTATGCGG CCGAGGCCTA CCACCAGGAC TTCCTCACGC GCCATCCGAG CCACGAGTAC
ATCGTGTTCA ACGACCTGCC CAAGATCGAC GACCTGAAGA AGCTCTTTCC CGAAAGCTAC
CGGCCGACGC CGGTGCTGGT GAATGCGGCA AAGGGCGGCT GA
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| Protein sequence | MRFPALTAGM LAAAVLAWHA APSFAEPARR VPAAAVDLTA PPTLKYDTAV FAGGCFWGVQ
GVFQRVKGVN NAVSGYAGGD ARTARYEDVG SGRTGHAEAV RITYDPRQIS YGKLLQIYFS
VAHDPTQFNR QGPDVGPQYR STVFAENLEQ ARVAKAYIAQ LNQAKTFNRQ LATTIEMSKP
FYAAEAYHQD FLTRHPSHEY IVFNDLPKID DLKKLFPESY RPTPVLVNAA KGG
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