Gene Vapar_2956 details

Gene Information

• Locus tag: Vapar_2956
• ID: 7972232
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 3116868
• End bp: 3117560
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644793541
• Product: putative mobilization protein MobD
• Protein accession: YP_002944842
• Protein GI: 239815932

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTCCA TCAATTTCAT CGGCGGCGAA AAAGGCGGTG TCGGCAAGTC GGTCACGGCG 
CGCGTGCTGG CGCAGTACTT CATCGACCAC AGCAAGCCCT TCACGGGCTT CGATACCGAT 
CGCTCGCACA GCTCGTTCAC GCGCTTCTAC GAAGGCTTTG CCTCGCCCAT CGTGGTCGAC 
AGCTTCGAGG GCCTGGACAC CGTGGTGAAC GGCTTCGAGA CGAATCCGCA GCAAAGCGTC 
ATCGTCGACC TGGCGGCCCA GACGCTCGCG CCGCTGTCGC GCTGGATCAA GGAATCGGAC 
CTGTTCGACG TGTTCGACGA GTTGGGCGTG GCCGTCAACT TCTGGCACGT GCTGGACGAC 
GGCAAGGACT CCACCGACCT GCTCGGCACG CTGATCGACA CCTTCGGCAA CCGGCCCAAC 
TACATCGTGG TGCAGAACTA CGGCCGCGGC AGCGACTTCG GCATGCTGCT GGCGTCGCAG 
TCGCTTTCCA AGGCCACCGC GAACGGCGCC CGGGTGATCA CGCTGCCGCG CCTGCACGAG 
GCGAGCATGC GCAAGATCGA TGCGCAGAAC ACCAGTTTCT GGAAGGCCGT GAACGACCGC 
GAAGGGCCGC ATGCGCTGGG CCTGCTGGAG CGCCAGCGCG TGAAGTCCTG GCTGGCGACC 
GCCTACGCGG CCTTCGACAC CCTGCCGCTC TAG 

 

Protein sequence

MSSINFIGGE KGGVGKSVTA RVLAQYFIDH SKPFTGFDTD RSHSSFTRFY EGFASPIVVD 
SFEGLDTVVN GFETNPQQSV IVDLAAQTLA PLSRWIKESD LFDVFDELGV AVNFWHVLDD 
GKDSTDLLGT LIDTFGNRPN YIVVQNYGRG SDFGMLLASQ SLSKATANGA RVITLPRLHE 
ASMRKIDAQN TSFWKAVNDR EGPHALGLLE RQRVKSWLAT AYAAFDTLPL