| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2942 |
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| Symbol | |
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| ID | 7972218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3098320 |
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| End bp | 3100926 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793527 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_002944828 |
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| Protein GI | 239815918 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGAAC CCGCCAAGAT CGATGTCGCC ACCTTGCGCG AGGCCTATCG CGCCAGGAAG
CTGGCGCTGT TCGACACCCT GCGCTTTGCG CGCGCGCCCA CGCGCAGCGT GCACACGGTG
CTGCGGCAGC TGTCGGCCCT GGCCGACCAG ACGCTGTGCA CGCTCTGGCG CGAGGCCGAT
TTCGGCGACG CGCTCGCGCT GGTGGCCGTG GGCGGCTTCG GCCGCGGCGA GCTGTTTCCC
TACTCCGATG TCGACGTGCT GCTGCTGCTG CCGCCCGAGG GCGAGGCCGG CGCGATCGAT
CCTGCGCGCA TCGAGGCCTT CATCGGCCAC TGCTGGGACG CGGGGCTCGA GATCGGCTCC
AGCGTGCGCA CCGTCGACGA GTGCCTGGCC GAAGCCGAGA AGGACGTCAC GGTCCAGACC
TCGCTGCTCG AATCGCGGCT GATCACGGGC GACAAGAAGC TCTTCGTGGG CTTCCGCCGG
CGTTTTGCAC GCGCCATCGA TCCGCAGGCC TTCTTCGTGG CCAAGTCGCA GGAAATGCGC
CACCGCCACC AGAAGTTCGA CAACACGCCC TACGCGCTCG AACCCAACTG CAAGGAATCG
CCGGGGGGCC TGCGCGACCT GCAGACCATC CTCTGGATGA CCAAGGCCGC GGGCTTCGGC
AGCCGCTGGG ACGACCTGGC CAAGAACGGC CTGGCCACCT CGTTCGAGGC ACAGCAGATC
AAGCGCAACG AAGCGCTGCT CTCGCTGATC CGCGCGCGCC TGCACGTGAT TGCCAACCGG
CGCGAGGACC GCCTGGTGTT CGACCTGCAG ACCGCGGTGG CGGCAAGCTT CGGCTATGAA
AGCGAATCGC AGCGCAAGTC GAGCGAGGCG CTGATGCGCC GCTACTACTG GGCGGCCAAG
GCGGTGTCGC AGCTCAACCA GATCCTGCTG CTGAACATCG CGGAGCGGCT GCAGCCGGTG
GACGAGCAGC ACACGCCGAT CAACGAACGC TTCTTCGAGC GCGCAGGCCT CATCGAGATT
GCGAGCGACG ACCTCTACGA GCGCGAGCCG CACGCCATTC TCGAGACCTT CCTGCTCTAC
CAGAAGACCA TCGGCGTGAA GGGCCTGTCG GCCCGTACGC TGCGCGCGCT CTACAACGCG
CGCCACGTGA TGGACAGCAA GTTCCGCAAC GACCCGGTCA ACCACCAGAC CTTCATGCGC
ATCCTGCTGC AGCCCTACGG CATCACGCAT GCGTTCCGGC TCATGAACCA GACCTCGGTG
CTGGGGCGCT ACCTGCGGGT GTTCCGCAGC ATCGTGGGGC AGATGCAGCA TGACCTGTTC
CACGTGTACA CGGTGGACCA GCACATCCTG ATGGTGCTGC GCAACGTGCG GCGCTTCTTC
ATCGCCGAGC ATGCGCATGA GTACCCGTTC TGCTCGCAGC TTGCGGCGGG CTGGGACAAG
CCATGGATCC TTTACGTGGC GGCGCTGTTC CATGACATCG CCAAGGGCCG CGGCGGCGAC
CATTCCACGC TCGGCGCACG CGACGTGCAG CGCTTCTGCA AGCAGCACGG CATCGCGCGC
GAGGATTCCA GGCTGATCGA ATTCCTGGTT GCGGAGCACC TGGTGATGAG CCAGGTCGCG
CAGAAGCAGG ACCTGAGCGA CCCCGAGGTG ATCGGCGCCT TCGCCAGGCG CGTGGGCAAC
GAGCGCTACC TCACGGCGCT CTACCTGCTG ACGGTGGCCG ACATCCGCGG CACCTCGCCG
CGCGTGTGGA ATGCCTGGAA GGGCAAGCTG CTCGAAGACC TGTACCGCTA CACGCTGCGC
GCGCTCGGCG GCCGCATGCC CGATCCCGAC GCCGAGGTGG AATCGCGCAA GCGCGAGGCG
CTGGTGCAGC TGGCCCTGCA CGCGCAGCCC TTCGAGGCCC ACAAGGCCCT GTGGGCCACG
CTCGACGTCG GCTACTTCAT GCGCCACGAG GCCACCGAGA TCGCCTGGCA TGCCAAGCAG
CTCTCGCGCT TCGTGCCGCC GCCCAACGTG CCCATCGACC CCAAGGCGCC GCCGATCGTG
CGGGCCCGTC TTTCGCCGGT GGGCGAAGGC CTGCAGGTGG TGGTCTACAC GCCCGACCAG
CCCGACCTGT TCGCGCGCAT CTGCGGCTAC TTCGACCAGG CCTCGTTCAG CATTCTCGAT
GCGAAAGTGC ACACCGCGAC CAACGGCTAC GCGCTCGACA CGTTTCAGGT GGTGACCACC
TTCCTGCCCG ACCACTACCG CGATCTCATC AGCATGGTGG AGTCGGGCCT GGCGCAGACG
CTGACCGAAG CCGGCCCCCT GCCCCCGCCC AGCGTGGGCC GCGTGTCGCG GCGCGTGCGC
AGCTTTCCGA TCAAGCCGCG CATCAGCCTT TTGCCCGACG ACAAGGCCCA GCGCTGGCTG
CTCAACATCT CGGCCAGCGA CCGCGCCGGG CTGCTCTATT CGGTGGCGCG CGTGCTCGCC
CGGCATCACC TGAACCTGCA GCTCGCCAAG GTCACGACGC TCGGCGAGCG CGTGGAAGAC
ACCTTCCTGA TCAGCGGGCC CGAACTGCAG GGCCAGAAGA CGCAGTTGGC CATCGAGACC
GACCTGATGG AAGCGCTGGC CTCCTGA
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| Protein sequence | MIEPAKIDVA TLREAYRARK LALFDTLRFA RAPTRSVHTV LRQLSALADQ TLCTLWREAD
FGDALALVAV GGFGRGELFP YSDVDVLLLL PPEGEAGAID PARIEAFIGH CWDAGLEIGS
SVRTVDECLA EAEKDVTVQT SLLESRLITG DKKLFVGFRR RFARAIDPQA FFVAKSQEMR
HRHQKFDNTP YALEPNCKES PGGLRDLQTI LWMTKAAGFG SRWDDLAKNG LATSFEAQQI
KRNEALLSLI RARLHVIANR REDRLVFDLQ TAVAASFGYE SESQRKSSEA LMRRYYWAAK
AVSQLNQILL LNIAERLQPV DEQHTPINER FFERAGLIEI ASDDLYEREP HAILETFLLY
QKTIGVKGLS ARTLRALYNA RHVMDSKFRN DPVNHQTFMR ILLQPYGITH AFRLMNQTSV
LGRYLRVFRS IVGQMQHDLF HVYTVDQHIL MVLRNVRRFF IAEHAHEYPF CSQLAAGWDK
PWILYVAALF HDIAKGRGGD HSTLGARDVQ RFCKQHGIAR EDSRLIEFLV AEHLVMSQVA
QKQDLSDPEV IGAFARRVGN ERYLTALYLL TVADIRGTSP RVWNAWKGKL LEDLYRYTLR
ALGGRMPDPD AEVESRKREA LVQLALHAQP FEAHKALWAT LDVGYFMRHE ATEIAWHAKQ
LSRFVPPPNV PIDPKAPPIV RARLSPVGEG LQVVVYTPDQ PDLFARICGY FDQASFSILD
AKVHTATNGY ALDTFQVVTT FLPDHYRDLI SMVESGLAQT LTEAGPLPPP SVGRVSRRVR
SFPIKPRISL LPDDKAQRWL LNISASDRAG LLYSVARVLA RHHLNLQLAK VTTLGERVED
TFLISGPELQ GQKTQLAIET DLMEALAS
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