| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2926 |
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| Symbol | |
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| ID | 7972202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3077684 |
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| End bp | 3078379 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793511 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944812 |
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| Protein GI | 239815902 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.103898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAGC TTCACGACAT CCATGCCTAC TACGGCAAGA GCCATGTGCT GCATGGCGTT
TCCTTCAACG TGGGCGCCGG CGAGATCGTC GCGCTGCTGG GACGTAACGG CTCCGGCCGC
TCGACCACCG CCAAGGCCAT CATGGGCCTG GTGCATGCCG AGGGTACGCT GCGCTGGAAG
GACCAGGACA TCCTGCGCAG GAAGGCCTAC GAGATCGCAC ACCTGGGCAT CGGCTACGTG
CCCGAGAACC GCGACATCTT TCCCAAGCTC ACGGTCCACC AGAACCTGCT CCTGGGCCAG
AAGGGCTCGG GCAAGGGAAG CCGCTGGTCC TTCGACGACA TGTACGGCAT GTTCCCGCGC
CTCAAGGAGC GCCAGCACAC CGAGGCCGGC GTGCTCTCGG GCGGCGAGCA GCAGATGCTC
ACGCTGTGCC GCACCCTGAT GGGCGACCCC GACCTGATCA TCATCGACGA GCCCACCGAA
GGCCTTGCAC CCAAGATCGT CGAACTGGTG GGGCAGTACC TGAAGACGCT CAAGGACAAG
GGCATCTCGG TGCTGCTGAT CGAGCAGAAG CTGACCATCG CGATGCAGAT ATCCGACCGC
GCGCTCGTCA TGGGCCACGG CAGCATCGTG TTCGACGGCA CGCCCGACGG CCTGCGCGCT
GACGCCACCA CTCGCAAAGA GTGGCTAGAG GTCTGA
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| Protein sequence | MLKLHDIHAY YGKSHVLHGV SFNVGAGEIV ALLGRNGSGR STTAKAIMGL VHAEGTLRWK
DQDILRRKAY EIAHLGIGYV PENRDIFPKL TVHQNLLLGQ KGSGKGSRWS FDDMYGMFPR
LKERQHTEAG VLSGGEQQML TLCRTLMGDP DLIIIDEPTE GLAPKIVELV GQYLKTLKDK
GISVLLIEQK LTIAMQISDR ALVMGHGSIV FDGTPDGLRA DATTRKEWLE V
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