| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2918 |
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| Symbol | |
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| ID | 7972194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3068507 |
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| End bp | 3068971 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793503 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_002944804 |
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| Protein GI | 239815894 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCCC CCGATTCCAC CGACATCAAC ATCCTCTCCT ACACGAGCCA GATCCCGTTC
GCGCGGCACC TGGGCTTCGA GCTCACCAAG TTCGAGGGCG GCGAGTCCGA GATCATCTAC
ACCGCCAAGC CCGAACATCT CAACACCTTC GACGTGACGC ACGGCGGCGC CTGCATGACG
CTGCTCGACA TCACCATGGC GGCCGCCGCA CGCAGCGTGG CGCCCGAAAC CGGCGTGGTC
ACCATCGAGA TGAAGACCAG CTTCATGCAG CCTTCGGTCG GGCCGCTGCA TGCGCGCGGC
ACGCTGATCC ACCGCACCGC GACGCTGGCC TTCACCGAGG CCAAGATCTA CGACGAACTG
GAGCGCGTAT GCGCGCACGC CACCGGCACC TTCAAGTACG TGAAGCGCCG CTTGCCCACC
GGCCCCGCGA GCGCCAATGC GATGCGCCCA CCTTCCACCG ATTGA
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| Protein sequence | MPSPDSTDIN ILSYTSQIPF ARHLGFELTK FEGGESEIIY TAKPEHLNTF DVTHGGACMT
LLDITMAAAA RSVAPETGVV TIEMKTSFMQ PSVGPLHARG TLIHRTATLA FTEAKIYDEL
ERVCAHATGT FKYVKRRLPT GPASANAMRP PSTD
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