| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2896 |
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| Symbol | |
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| ID | 7970785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3041788 |
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| End bp | 3043218 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793481 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002944782 |
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| Protein GI | 239815872 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.17584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCG CGGCAGCGGT CGAGAGCGAC GCCGCGCAGG CCGCCGACGG GCTGGACCAG
CCCGCGCGCC AGCGCGCAAT GCTGGTGATC ATCCTCGGCA TCATGGTGGC GGTGCTCGAC
GGCACCATCG TCAACCTGGC GCTGCCGGGC ATTGCGCGCG AACTGCAGGC CAGCCCCTCG
CATGCGATCT GGGTGGTCAA TGCCTACCAG ATCGCCACGC TGGTGATGCT GCTGCCGCTG
GCATCGCTCG GCGACCTGGT CGGCTACCGG CGCGTCTACC TGGTGGGCAT GGCGGTATTC
ACGGTGTCTT CGATCGGCGC CACCTTTGCC GATTCGCTGG CCACGCTGAT TGCCGCGCGC
ACCTTCCAGG GCCTGGGCGC GGCCGGCATC ATGAGCGTGA ACGCGGCGCT GGTGCGGCTG
ACCTTTCCGT CGGCGCTGCT GGGGCGCGGC ATGGCGATCA ACTCGATGGT GGTGGCCACC
TCCTCGGTGG CCGGGCCTTC GGTGGCGGCC GCCATTCTCT CGGTGGCTTC GTGGCCGTGG
CTGTTTGCCA TCAACGTGCC GCTGGGCGCC ATCACGCTGG CGCTGGGCCT CAAGGCGCTG
CCGTTCAACC GCGTGGCGCC GGCGGCGGGC CTGCGCTTCT CGCCCATCGA CGTGGCGCTC
AACGTGCTGA TGTTCTCGCT GGTGTTCCTG GGCGTCGACC GGCTGGGCGT GCGCGAGGGC
GGCGTGCCCG GCGGCGCGCA GGCCTCGGCC TGGGCCATCC TGCTGGCCGG CGTGGCGGTG
GGCTTCGTCT ATCTGCGGCG CCAGCGCAGG CTGGCGGTGC CGCTGTTCCC GATCGACCTG
CTGCGCATTC CGGTGTTCGC GCTTTCCATG GGCACGTCGG TGGCGGCCTT CTGCGCGCAG
ATGCTGGCCT ACATTGCGCT GCCGTTCCTG CTGCTCGAGG TGTACGGCCG CAGCCACATC
GAGGCCGGGC TGCTCATCAC CGCCTGGCCG CTGGCCATCG TGGCCATGGC GCCGCTCGCG
GGCCGGCTGA TCGGGCGCTA TCCGGACGGG CTGCTGGGCG GCATTGGCCT CGGCCTGCTC
GCCATCGGCC TGGCGCTGCT GGCGGCGCTG CCGGCGCATC CGGGCAATGC CGACATCGCC
TGGCGCATGG CGCTGTGCGG GCTGGGCTTC GGCCTGTTCC AGTCGCCGAA CAACCACACC
ATCGTGACCT CGCCGCCGGC GCACCGCAGC GGTGCGGCCA GCGGCATGCT GGGCACGGCG
CGGCTCACGG GGCAGACGCT GGGCGCGGTG GTGCTGGCCG GCGTGTTCAG CATCTGGACC
CCGCACGGCG GCCGCGGCCC GGTGGTGGCG CTGGTGCTGG CGGCCTGCTG CGCGGGCCTG
GCGGCGGTCT TCAGCAGCCT GCGGCTGAAG ACGACGGGGC AGGGCGGCTG A
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| Protein sequence | MQAAAAVESD AAQAADGLDQ PARQRAMLVI ILGIMVAVLD GTIVNLALPG IARELQASPS
HAIWVVNAYQ IATLVMLLPL ASLGDLVGYR RVYLVGMAVF TVSSIGATFA DSLATLIAAR
TFQGLGAAGI MSVNAALVRL TFPSALLGRG MAINSMVVAT SSVAGPSVAA AILSVASWPW
LFAINVPLGA ITLALGLKAL PFNRVAPAAG LRFSPIDVAL NVLMFSLVFL GVDRLGVREG
GVPGGAQASA WAILLAGVAV GFVYLRRQRR LAVPLFPIDL LRIPVFALSM GTSVAAFCAQ
MLAYIALPFL LLEVYGRSHI EAGLLITAWP LAIVAMAPLA GRLIGRYPDG LLGGIGLGLL
AIGLALLAAL PAHPGNADIA WRMALCGLGF GLFQSPNNHT IVTSPPAHRS GAASGMLGTA
RLTGQTLGAV VLAGVFSIWT PHGGRGPVVA LVLAACCAGL AAVFSSLRLK TTGQGG
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