| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2882 |
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| Symbol | |
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| ID | 7970771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3028842 |
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| End bp | 3029627 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793467 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944768 |
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| Protein GI | 239815858 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0937154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACG ACATTGCCCG CGCCCCGGCG CGCAAGAACG CCGACCAGCC GCCGGTGCTG
GTCTACGAAG AGGTGCGCAA GCTCTATGGC GACTTCGTGG CGCTCGATGG CGTCTCGCTG
CAGGTCCACA AGGGCGAGGT GATGTGCCTG ATCGGCCCTT CGGGCTCGGG CAAGTCGACC
CTGCTGCGCT GTACCAACGC GCTGGAAACC ATCAACGGCG GGCGCGTGCT GATCGACGGC
GTGCCGCTGC CCGCGCAGGA ATCGGCGGTG CGCAAGGTGC GCCAGCGCAT GGGCATGGTG
TTCCAGAGCT TCGAGCTGTT CCCGCACAAG TCGGCGCTCG ACAATGTGGC CATGGGCCCC
ATCACCGTGC TGGGCATGCG CGAGTCCGAG GCCCGGGCGC GCGCCATGGC GCTGCTCGAG
AAGGTCGGGC TCTCGGCCAA GGCCGGCAAC TTTCCGGCCA ACCTCTCGGG CGGCCAGCAG
CAGCGCGTGG CCATCGCGCG CGCCCTGGCC ATGGAGCCCG AAGTGATGCT GTTCGACGAG
CCCACCTCCG CGCTCGACCC CGAGACCGTG GGCGAAGTGC TCAGCGTGAT GCAGAAGCTC
GCGCAGGAGG GCATGACCAT GATCGTGGTC ACGCATGAAA TGGGCTTTGC GCGGCGCGTG
GCCGACTGGG TGGTGGTGTT CGAGTCCGGC GCCATCATCG AACAGGGCCC GCCCGCGCAG
ATCTTCGAGC ACCCCACCGT GGAGCGCACG CGCGACTTCC TCGGCCACCT CGGCTGGAAC
GGCTGA
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| Protein sequence | MNNDIARAPA RKNADQPPVL VYEEVRKLYG DFVALDGVSL QVHKGEVMCL IGPSGSGKST
LLRCTNALET INGGRVLIDG VPLPAQESAV RKVRQRMGMV FQSFELFPHK SALDNVAMGP
ITVLGMRESE ARARAMALLE KVGLSAKAGN FPANLSGGQQ QRVAIARALA MEPEVMLFDE
PTSALDPETV GEVLSVMQKL AQEGMTMIVV THEMGFARRV ADWVVVFESG AIIEQGPPAQ
IFEHPTVERT RDFLGHLGWN G
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