Gene Vapar_2869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2869 
Symbol 
ID7970758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3017277 
End bp3018011 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID644793454 
Producthypothetical protein 
Protein accessionYP_002944755 
Protein GI239815845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCA CCCGGACCAC CGACGGCCAC ACGATCGCCA CTGGACGCCA TGCAACGCAA 
GGCGTGCTGG ATCCGCTCAT GCAGCGCCCT TCGCATGCGG CCCGCGCGGA CTCCGGCACG 
CGGACCGCCA CGGTGATCGC CACCGATGGC GATCCCTGGT TCGACGTCGA CCTCGACGAC 
GGCCAGGGAT CGCTGCGCTG CCGGCGCGTC GCCAGCTGCC TGCTGCTGCC TGCTCCGGGC 
GATACGGTGC TGATCACCTC GACCCGCCAG GGCGACAGCT ACGTCATCGC GGTGGTCGTC 
CAGGCCGATC CGCGGCAGGC AACGCTGGCC GTGGACGGCG ACCTGACGCT GGTGTCGCGC 
TCGGGTGGCA TCCGCGCGCG CAGCGCCGGC CCGATGGCGC TGGAGTCGGA CACCTCGATC 
GCCATGCAGT CGCCCGAGTG GCGCGCGCAG GCCCGGCGGG CCCATTGCGA GATCGGGGAG 
ATGGACTACC AGGGCGCCCG CATCCGCTTC AGCGTGCTGG TGTCGCGCTT CGTCGGGCGC 
ACCTGCGAGG TGGTGCTGGA TCGCCTCAAC CTGCTCACCC GCTCGAGCTT CCGCCTGACC 
GAGGAGATGG AACAGGTGCG TGCCGGCCAG ATCGACATCC AGGCCGAACA GACCTTGCGC 
CTGCATTCGA AGAACACGCT GCTGACCAGC AAGGGGCTGG TCAAGGTCGA TGCCGAGCAG 
ATCCACATGG GCTGA
 
Protein sequence
MTSTRTTDGH TIATGRHATQ GVLDPLMQRP SHAARADSGT RTATVIATDG DPWFDVDLDD 
GQGSLRCRRV ASCLLLPAPG DTVLITSTRQ GDSYVIAVVV QADPRQATLA VDGDLTLVSR 
SGGIRARSAG PMALESDTSI AMQSPEWRAQ ARRAHCEIGE MDYQGARIRF SVLVSRFVGR 
TCEVVLDRLN LLTRSSFRLT EEMEQVRAGQ IDIQAEQTLR LHSKNTLLTS KGLVKVDAEQ 
IHMG