| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2862 |
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| Symbol | |
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| ID | 7970751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3007287 |
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| End bp | 3008165 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793447 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_002944748 |
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| Protein GI | 239815838 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACA AGACCATGCC CCAGAGAAAA GACTTCCGCT TCTTTCATCG CCTGCGCGTG
CGCTGGGCCG AAGTCGACAT GCAGAAGATC GTATTCAATG CGCACTACCT GATGTACTTC
GACACCGCCA TTGCCGACTA CTGGCGCGCG CTCGCGCTGC CATACGAAGA AGCCATGCAT
GCGCTGGGCG GCGACCTCTA CGTGCGCAAG GCCACGGTCG ACTTTCGCGC CTCGGCGCGC
ATGGACGACG TGATCGACGT GGGCATGAAG TGCGCGCGCA TCGGCAACTC GTCCCTCGTC
TTCGAGGGTG CGCTGTTCCG GCAGGACCAG TACCTGGTGG GCTGCGAGCT CGTCTATGTG
TTTGCCGACC CGGCCACGCA GACCTCGAAG CCGGTGCCGG CGGCACTGCG CGAAATCCTC
ACGGGCTTCG AGGCCGGCGA GCCGATGCGC GCCGTGGAAA CGGGCGACTG GAAAACCCTG
GGCGAAGGCG CGGGTGCGCT GCGCCGCGCG GTCTTCATCG AGGAGCAGAA CATTCCCAAG
GAACTGGAGT GGGACGCGCA CGATGCGGTG GTGCTGCACG CGGTGGTCCG CAACCGGCTC
GGCCAGGTGA TTGCGACCGG CCGGCTGCTC GATGCGGTCG ACGGCACCGC CATGCTCGGC
CGCATGGCCG TGCACCGCGC GCTGCGCAGC GGCGGCCACG GTGCCGCCGT GATGCAGGCG
CTGGAGGCCG CAGCCAAGGC GCGCGGCGAC CGCGAGATCG GCCTGCACGC GCAGCGCAGC
GCGGAGCGCT TCTATGCGCG CCTGGGCTAT GCCGTGCACG GCGAGCCCTT CGAGGAAGCC
GGCATCCCGC ACATCGAGAT GCGCCGCACG CTGGCCTGA
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| Protein sequence | MNDKTMPQRK DFRFFHRLRV RWAEVDMQKI VFNAHYLMYF DTAIADYWRA LALPYEEAMH
ALGGDLYVRK ATVDFRASAR MDDVIDVGMK CARIGNSSLV FEGALFRQDQ YLVGCELVYV
FADPATQTSK PVPAALREIL TGFEAGEPMR AVETGDWKTL GEGAGALRRA VFIEEQNIPK
ELEWDAHDAV VLHAVVRNRL GQVIATGRLL DAVDGTAMLG RMAVHRALRS GGHGAAVMQA
LEAAAKARGD REIGLHAQRS AERFYARLGY AVHGEPFEEA GIPHIEMRRT LA
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