| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2847 |
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| Symbol | |
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| ID | 7970736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2994291 |
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| End bp | 2995115 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793432 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_002944733 |
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| Protein GI | 239815823 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.817208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTCA CTCTGACTTC TTCGACGCCT GCGACGCATG TGCGGGCGCC CATGGCGCTC
GGCCGCTGCA CCCTCGTCGG TGCCGGCCCC GGCGATCCCG AACTGCTCAC GCTGAAGGCG
CTCAGGGCCA TCCAGTCGGC CACCGTGCTG CTCGTCGACG ACCTGGTCAG CGAAGACATC
GTCGCCATGG CAGCGCCGGG CGCGCGCGTG ATCCACGTCG GCAAGCGCGG CGGCTGCAAG
AGCACGCCGC AAAGCTTCAT CGAGCGGCTG ATGATCATGG CGGTGCGCGA AGGCGAGCAC
GTGGTCCGGC TCAAGGGCGG CGACCCCTTC ATCTTCGGCC GCGGCGGCGA AGAGGTCGAG
CACCTCGCGC AGGCCGGCAT CCATGTGGAG GTGGTGAACG GCATCACCGC CGGGCTGGCC
GGGCTGACCT CGCTCGGCGT GCCGCTCACG CACCGTGCGC ATGCGCAGGG CGTGGTGTTC
ATCACCGGCC ACGCGAAGCC CGGATCGCCG GGGCCGGACT GGCGCACGCT GGCGGCCACG
GCCCATTCGG CGCGCCTCAC GCTGGTCATC TACATGGGCG TATCGAGCGC GGGCTCGATC
CAGGACGAAC TGCTGAGCGG ACTGCCGCCG GCCACGCCTG TCGTGGTGGT GCAGAGCGCC
AGCCTGCCCT TGCAGCGGCA CGCCGTCGGC ACGCTCGCGA CGCTGCAGCG CACGATTGCC
GACAACAGCC TTGGCAGCCC CTCGATCATC GTGGTCGGCG ATGTCCTGCA AGGGCTCGCG
GCCGCAGCTT CCTCCGCGCA GCCCGCGCTG GAGAAGGCCG CCTGA
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| Protein sequence | MSLTLTSSTP ATHVRAPMAL GRCTLVGAGP GDPELLTLKA LRAIQSATVL LVDDLVSEDI
VAMAAPGARV IHVGKRGGCK STPQSFIERL MIMAVREGEH VVRLKGGDPF IFGRGGEEVE
HLAQAGIHVE VVNGITAGLA GLTSLGVPLT HRAHAQGVVF ITGHAKPGSP GPDWRTLAAT
AHSARLTLVI YMGVSSAGSI QDELLSGLPP ATPVVVVQSA SLPLQRHAVG TLATLQRTIA
DNSLGSPSII VVGDVLQGLA AAASSAQPAL EKAA
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