| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2829 |
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| Symbol | |
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| ID | 7971042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2974318 |
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| End bp | 2974827 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793414 |
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| Product | UspA domain protein |
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| Protein accession | YP_002944715 |
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| Protein GI | 239815805 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0510043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCAGC GAATTCTTGT TCCTGTCGAT GGAAGTTCGA CATCCAGCCA TGGCCTGGGC
GAAGCGATTC GCCTTGCCAA GGTCACCGCA GGGCGCCTGC GCCTGATCCA CGTCATCGAC
GAGCTCTCCT TCGCCCTGGC AATGGACGCC TACTCGGGCC GCACGGGCGA CTGGCTCGAT
GAACTGCGCG CCGCCGCCGC CAGGCTGCTC GAGGAAGGCA AGGCAAGGGC CGCCGCCGAA
GGCGTCGAGG CCGACTCGGT GCTGTGCGAC AACTTCAGGG GGGCCGTTCC CGACCGGGTC
ACGGCCGAGG CGGCTTCCTG GCCCGCGGAC CTGATCGTGC TGGGAACGCA CGGCCGGCGC
GGCCTCGGCC GCATGGTGAT GGGCAGCAGT GCGGAACAGA TCCTGCGCAG CGCGAGTGTT
CCGGTGCTGC TGGTGCGCGC GCCCGAATCG CATGCCAAGG CGGAAGCGGC GCGCTTCACC
ATGCCGGGCG GCGCGGTGGC AAGCCAGTAG
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| Protein sequence | MYQRILVPVD GSSTSSHGLG EAIRLAKVTA GRLRLIHVID ELSFALAMDA YSGRTGDWLD
ELRAAAARLL EEGKARAAAE GVEADSVLCD NFRGAVPDRV TAEAASWPAD LIVLGTHGRR
GLGRMVMGSS AEQILRSASV PVLLVRAPES HAKAEAARFT MPGGAVASQ
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