| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2817 |
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| Symbol | |
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| ID | 7971030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2963985 |
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| End bp | 2964122 |
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| Gene Length | 138 bp |
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| Protein Length | 45 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644793402 |
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| Product | cytochrome oxidase maturation protein, cbb3-type |
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| Protein accession | YP_002944703 |
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| Protein GI | 239815793 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3197] Uncharacterized protein, possibly involved in nitrogen fixation |
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| TIGRFAM ID | [TIGR00847] cytochrome oxidase maturation protein, cbb3-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.117314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACATCC TCTTCCTGCT GATCCCGCTG TCGGTCGTGC TGGTGCTCGC CATCCTTGGC
GGCCTCTGGT GGGCCATCGA GCGCGGGCAG TTCGAAGACA TCGAAATCGA AGGCGACCGC
ATCCTGCGCG GCGATTGA
|
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| Protein sequence | MDILFLLIPL SVVLVLAILG GLWWAIERGQ FEDIEIEGDR ILRGD
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