Gene Vapar_2807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2807 
Symbol 
ID7971020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp2953456 
End bp2954064 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content71% 
IMG OID644793392 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_002944693 
Protein GI239815783 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.48784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTCAG CCAGGCACAT CCAGTTCGCT GACCAGCCCG ACCTGTTCGG CGAGGCGCCC 
GCGGCCGCCA TCGAGGGCCT GCGCTACGAG CGCGAATTCC TCACGCGCGC CGAGGAAGCC 
GAGCTGCTGC GGCTCGTGCA GGGCTTCGAG CTGCGCGAGA TGCGCTACAA GGAATACACC 
GCGCGCCGCC GCGGCATCAG CTTTGGCGGC AGCTACGACT TCGACAAGCA CCGGCTGCGT 
CCCGGCGCGG CCATGCCGCC CGCGCTTCAC CCGCTGCGTG CGCGGGTGGC CGCGTGGATG 
GGCATGGCGC CCGAGGATTT CGCCCACATG CTGATCTCCG AATACCGGCC CGGCACGCCG 
CTCGGCTGGC ACCGCGACGT GCCGGACTTC GAGGACATCG TGGGCGTTTC GCTGCAGGGC 
GACGCGGTGA TGCAGCTGCG GCCCTATCCG CCGGCCAGCG CCAGCGCACC TGCGAGCCTG 
CAGCTGCTGA TCGAGCCGCG CTCCATCTAC ATGCTGCGCG GCGAAGCGCG CTGGGCCTGG 
CAGCACAGCA TCGCGCCGAC CGAGGCGCTG CGCTATTCCA TCACCATGCG CACGCGGCGG 
CGCGCGTGA
 
Protein sequence
MRSARHIQFA DQPDLFGEAP AAAIEGLRYE REFLTRAEEA ELLRLVQGFE LREMRYKEYT 
ARRRGISFGG SYDFDKHRLR PGAAMPPALH PLRARVAAWM GMAPEDFAHM LISEYRPGTP 
LGWHRDVPDF EDIVGVSLQG DAVMQLRPYP PASASAPASL QLLIEPRSIY MLRGEARWAW 
QHSIAPTEAL RYSITMRTRR RA