Gene Vapar_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2803 
Symbol 
ID7971016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2946033 
End bp2946638 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content70% 
IMG OID644793389 
ProductCheB methylesterase 
Protein accessionYP_002944690 
Protein GI239815780 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCGG ATGCCCGCCC CTTCCCTGCG CGGCGCGTCG AGGCCGTGGT GGTCGGCGCG 
TCCGCGGGCG GCATCGAGGC GCTGCTGGCG CTCCTGCACG GCATTCCACC GCCGTGGCGG
CTTCCGGTGG TGGTGGTCCT GCACTTGCCC GAAGGCCACC AGAGCCACCT GGCCGAGATC
TTTGCCGAGC GGCTGCACAT GCCGGTGCAC GAGGCCGCCG ACAAGATGCC GGTCGCGCCC
GACAGCCTGT ACTTCGCGCC GCCCGGCTAT CACCTGTCGA TCGAGCGCGA TCGGTGCTTT
TCGCTCAGCT GCGAACCGCC CGTGCACTTT TCGCGGCCGT CGATCGACGT GCTGATGGCC
TCGGCCGCCG ATGCCTACGG CCCCGCGCTC GCCGGGTTCC TGCTCACGGG CGCGAACGAC
GACGGCGCCG AAGGCCTGTT GCGCATTCAC ATGGCCGGCG GCCTCACTGC CGTCCAGGAC
CCGGAGGAAG CCCAGATTCC CACCATGCCC AGGGCAGCCA TTGCCCGCCA TTCCCCCGAT
CACGTGCTTG CCCTGCGCGA GCTTCGCACA TTGCTGCTGC AACTGGAGTC CGCCCATGCC
CATTGA
 
Protein sequence
MKPDARPFPA RRVEAVVVGA SAGGIEALLA LLHGIPPPWR LPVVVVLHLP EGHQSHLAEI 
FAERLHMPVH EAADKMPVAP DSLYFAPPGY HLSIERDRCF SLSCEPPVHF SRPSIDVLMA
SAADAYGPAL AGFLLTGAND DGAEGLLRIH MAGGLTAVQD PEEAQIPTMP RAAIARHSPD
HVLALRELRT LLLQLESAHA H