| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2797 |
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| Symbol | |
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| ID | 7971010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2941442 |
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| End bp | 2942407 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793383 |
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| Product | Muramoyltetrapeptide carboxypeptidase |
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| Protein accession | YP_002944684 |
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| Protein GI | 239815774 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.154146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAAAC ACATCTACAT CTATTCCCCC TCCAGCGCGA TTCGCGACAA GGCCGCCTTC
CGGCGCGGCG TGGCAAGACT CAAGGCCCTG GGCTACGAGG TCGAAATCGA CGAAGCCGCG
CTGGCCGTGC ACCAGCGCTT TGCGGGCGAC GACGCGACGC GCCTCGCTGC CATCGGCCGC
GCTGCCGCGA GCGGCGCCGA CATAGCGCTG ATCGCACGCG GCGGCTACGG GCTCACGCGC
ATCCTCGACG CGATTCCGTA CAAGGCCGTG GCCAAGGCGA TCGGGCGCGG CACCGAATTC
GTCGGCCTCA GCGATTTCAC CGCGCTGCAG TGCGCACTCT TCGCCAAGAC CGGCGCCGTG
ACCTGGGCCG GCCCCGCGGT CGGCGAAGAC TTCGGTGCCG AAGGCGGCGC GGACGACATC
ATGGAAGCCT GCTTCGACGA CCTGGCGAGC GGGCAGGGCG AAGGCACCGG CTGGCGCATG
CCGGTGCGCG ATGCCGGCCT CAAGGTGAAG CCCGTGCACG ACGCCACCTT GTGGGGCGGC
AACCTGTGCG TGCTCGCGAG CCTGCTCGGA ACGCCCTATT TCCCGGTAGT GGAGAAGGGC
GTGCTGTTCA TCGAAGACAC CAACGAGCAT CCCTACCGCA TCGAGCGCAT GCTCGACCAG
CTGCGCATGG CCGGCGTGCT GGCCAGGCAG CGCGCCATCG TCTTCGGCCA GTTCACGGGC
ATGCGCAAGG TGCCGGGCTA CGACCGCGGC TTCGGCTTCG ATGCGGTGGT CGACCGGCTG
CGCGCCACGC TCAAGGTGCC CGTGCTCACG GGCTTGCCTT TCGGTCACGT GCCGACCAAG
GTGCTGCTGC CTGTGGGCGC GAAGGTCGAA CTGGCGGCCG AAGGGCGCGA CGTCTTCATG
GTGTGGGGCC ACCGGCATGG CGGCCACGAC CATGACCATG ACCACAGCCA CGGCCATGCG
CATTGA
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| Protein sequence | MSKHIYIYSP SSAIRDKAAF RRGVARLKAL GYEVEIDEAA LAVHQRFAGD DATRLAAIGR
AAASGADIAL IARGGYGLTR ILDAIPYKAV AKAIGRGTEF VGLSDFTALQ CALFAKTGAV
TWAGPAVGED FGAEGGADDI MEACFDDLAS GQGEGTGWRM PVRDAGLKVK PVHDATLWGG
NLCVLASLLG TPYFPVVEKG VLFIEDTNEH PYRIERMLDQ LRMAGVLARQ RAIVFGQFTG
MRKVPGYDRG FGFDAVVDRL RATLKVPVLT GLPFGHVPTK VLLPVGAKVE LAAEGRDVFM
VWGHRHGGHD HDHDHSHGHA H
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