| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2765 |
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| Symbol | |
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| ID | 7970978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2912851 |
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| End bp | 2913228 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644793352 |
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| Product | transcriptional regulator, HxlR family |
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| Protein accession | YP_002944653 |
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| Protein GI | 239815743 |
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| COG category | [K] Transcription |
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| COG ID | [COG1733] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.307556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACGC CTTCTTCTCA TCCAACCTGC GGTACCGGCG GCTTCTCCTG CGGGCTCGAC
GCCACGCTGC GCATCATCTC GGGCAAGTGG AAACCGTTGA TCCTGTTTTT CCTGCGCGAC
GGCCCGAGGC GCTACGGCGA ACTCAAGCGC TTGATCGAAG GCGTCAGCGA CAAGGTCCTG
ATCCAGCATC TGAAGGATCT GGAGGCCGAT CGCGTGCTGG CGCGGACCGA CTACAAGGAG
GTACCGCCGC GCGTGGACTA CGCGCTGACC CCGCTCGGCC GCAGCCTGGC CGAAGCGATC
GTTCCGCTGT GCACCTGGGG AACCGAGCAC ATGGCGGAAG TGGCAAGCAT CTTCGCCAAG
CGCGAAACTT TGTCCTAG
|
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| Protein sequence | MTTPSSHPTC GTGGFSCGLD ATLRIISGKW KPLILFFLRD GPRRYGELKR LIEGVSDKVL
IQHLKDLEAD RVLARTDYKE VPPRVDYALT PLGRSLAEAI VPLCTWGTEH MAEVASIFAK
RETLS
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