| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2752 |
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| Symbol | |
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| ID | 7970965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2903508 |
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| End bp | 2904437 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793339 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002944640 |
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| Protein GI | 239815730 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCTGC GCCTGACCCA CGGCGGGGCC GTGTGGCTGA TGGTTGCCGT GACCCTGATG
TGGGCCACGG CGGGCGTTGT CACGCGGCAC CTGGCGCAGG CCCACAGTTT CGAGATCACC
TTCTGGCGCA GCTTCTTCAC GATGCTTGCG CTGCTGGTGA TCTTGCCGCT TTGGCGGGGC
CGGGCGGTGT TCTCGCAGAT CCGCTCGGGC GGGCGCGAGC TCTGGATCTC GGGCGTCTGC
TGGACCGTGA TGTTCACTGC CTTCATGGTG GCGCTCACGC TGGCTTCGAC GGCCAGCGTG
CTGGTCACGA TGTCGCTGGG CCCATTGCTC ACTGCGCTGG CCGCGCGCCT CTTCATCGGT
CACCGCCTGC CCGTGCGGAC TTGGGTGGCC ATCGTGGTGG CCGGCCTCGG CATCGCGTGG
ATGTACGGCA CGCAACTGAT GCAGGGCGGG GCGGCGGGCG GATCGCTGCT CGGAACGCTG
GTGGCGCTGT GCGTGCCGCT CGCGGGCGCC ACCAACTGGA CGGTGGTCCA GCATGCGCGC
GCCAAGGGAC ATGACATCGA CCTGGTTCCC GCGGTGCTGA TCGGCGCGGC GCTGAGCGCG
CTGCTCACGC TGCCTTTTGC CTTGCCGTTC CAGGCCAATG CGCACGATCT CGGCCTGCTC
GCTTTCCTCG GTGTTTTCCA GCTGGCCATT CCCTGCGTGC TGGCGGTCCT GTGCGCGCAG
GTGCTCAAGG CGCCCGAGGT GGCGCTGCTC GCGCTGCTCG AGGTGATCTT CGGCATTGCA
CTGGCCTGGA TCGGCGCGGG CGAGGAGCCG GCTGCGAGCG TGCTGACCGG CGGCGCGCTG
GTCATCGGTG CGCTGGTTTT CAACGAGCTG CTGGCGCTGC GCGGGCGCCG CGCCACCGTG
GCCGACGACG CGCTTCCCAC CGCCCACTGA
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| Protein sequence | MLLRLTHGGA VWLMVAVTLM WATAGVVTRH LAQAHSFEIT FWRSFFTMLA LLVILPLWRG
RAVFSQIRSG GRELWISGVC WTVMFTAFMV ALTLASTASV LVTMSLGPLL TALAARLFIG
HRLPVRTWVA IVVAGLGIAW MYGTQLMQGG AAGGSLLGTL VALCVPLAGA TNWTVVQHAR
AKGHDIDLVP AVLIGAALSA LLTLPFALPF QANAHDLGLL AFLGVFQLAI PCVLAVLCAQ
VLKAPEVALL ALLEVIFGIA LAWIGAGEEP AASVLTGGAL VIGALVFNEL LALRGRRATV
ADDALPTAH
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