| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2744 |
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| Symbol | |
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| ID | 7972345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2892165 |
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| End bp | 2893799 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793331 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944632 |
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| Protein GI | 239815722 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCAAA TCAAGCATCT CCAGCCGCTG CTGGACGTGA AAGAGCTGCG CGTGGCCTTC
GGCGGCAAGG AGGTGGTGCA CGGCATCGAC TTCCGCATTG CCGCGGGCGA GAAGCTCGCG
CTGGTCGGCG AATCGGGTTC GGGCAAGACC GTGACGGCGC TGTCGCTGCT GCGCCTGGCG
CAGAACGCCG ACGTGGCCGG CGCCGCGACC TTGTTCGGCT CCGCAGATGC GCCAAGCGGG
CGCGACCTGC TCTCGATTCC GGAGCGTGAG CTGCGCGGCA TCCGCGGCAA GGAGATCGCG
ATGATCTTCC AGGAGCCGAT GACCGCCCTC AACGCGCTCT ACACCGTGGG CGACCAGATC
GCCGAGGTGC TCGAACTGCA CGAGGGCCTG TCGGCGCGCG CGGCCCAGGC GGCCGCCGTG
CAGCTGCTGG CCGACACCGG CATTCCGGAG CCGGCGCGGC GGGCGAGGGC GTTTCCGCAC
CAGCTCTCGG GCGGCCAGCG CCAGCGCGCG ATGATCGCCA TGGCGCTCGC CTGCAAGCCG
CGCCTGCTGT TGGCCGACGA GCCGACCACC GCGCTCGACG TCAGGGTGCG CGCGCAGATC
CTCGAGTTGC TCGCCGATCT GCAGCGCAAG CATGGCATGG CCGTGCTGCT CATCACGCAC
GACCTCAACC TGGTGCGCCG CTTCGCCGAC CGGATTGCCG TGATGGAAGA CGGCCACGTG
GTGGAGCAGG GCGCCGTGGC GGCCGTGTTC GAGGCGCCGC AGCACGCCTA CACCCGCAAG
CTGATCGACA GCCACCCGGA GCGCGATGTC ATCGCCGTGC CCGCGGGTGC CGGCGCGCGG
CCGGTGCTCG AGGCCACCGG CCTGTGTGTG AGCTACCCCG TGCCGCGGCC CGGTTTTGCC
GGCTGGTTCC GCAAGGGCGA ATTCATTGCG GTGCAGAACG CGGATTTCCG CATCGCACCG
GGCGAAACGC TGGGCGTGGT CGGCGAGTCC GGATCGGGCA AGTCCACGCT GGCGCTGGCC
GCCCTCGGGC TGCTGAAGCA CCAGGGCGCG CTCAAGGTGG ACGGCAAGGG CTGGGCGGTG
GACCGGAGTT CCGACCTGGC CTTGCGCCGG GTCATGCAGG TGGTTTTCCA GGACCCGTTC
TCCTCGCTCT CGCCGCGCAT GACGGTCGAG CAGATCGTGG GCGAGGGGTT GCGCGTGCAC
GCGCCTGAGC TCGACACGGC GCAGCGCCGC GCGCGGGCGC TGGCAGCGCT GGCCGACGTG
GGCCTGGGCG AGGCGCAGTT TCCCTCGCTG CTCGACCGCT ATCCGCACGA GTTCTCGGGC
GGACAGCGCC AGCGGCTCGC GATTGCGCGC GCGCTCATCG TCGACCCGCA GCTGCTGGTG
CTCGACGAGC CCACCAGCGC GCTCGACGTG ACCATCCAGA AGCAGGTGCT GGGCCTGCTG
CAGCGCCTGC AGCGGGAGCG CGGCCTGAGC TACCTGCTGA TCACGCACGA CGTGGAGGTG
ATCCGCGCCA TGGCGCACCA GGTCATCGTG ATGAAGGACG GCGCCATCCT CGAAGCCGGC
GCCGTGGAGC GCGTGCTCGA CGCGCCCGAG CACCCCTACA CCAAGAAACT GGTGGCCGCC
GCGCTGCTGG AATAG
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| Protein sequence | MSQIKHLQPL LDVKELRVAF GGKEVVHGID FRIAAGEKLA LVGESGSGKT VTALSLLRLA
QNADVAGAAT LFGSADAPSG RDLLSIPERE LRGIRGKEIA MIFQEPMTAL NALYTVGDQI
AEVLELHEGL SARAAQAAAV QLLADTGIPE PARRARAFPH QLSGGQRQRA MIAMALACKP
RLLLADEPTT ALDVRVRAQI LELLADLQRK HGMAVLLITH DLNLVRRFAD RIAVMEDGHV
VEQGAVAAVF EAPQHAYTRK LIDSHPERDV IAVPAGAGAR PVLEATGLCV SYPVPRPGFA
GWFRKGEFIA VQNADFRIAP GETLGVVGES GSGKSTLALA ALGLLKHQGA LKVDGKGWAV
DRSSDLALRR VMQVVFQDPF SSLSPRMTVE QIVGEGLRVH APELDTAQRR ARALAALADV
GLGEAQFPSL LDRYPHEFSG GQRQRLAIAR ALIVDPQLLV LDEPTSALDV TIQKQVLGLL
QRLQRERGLS YLLITHDVEV IRAMAHQVIV MKDGAILEAG AVERVLDAPE HPYTKKLVAA
ALLE
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