| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2674 |
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| Symbol | |
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| ID | 7972273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2817447 |
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| End bp | 2819855 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793262 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944565 |
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| Protein GI | 239815655 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4258] Predicted exporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.22432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGAGC GCGAGACCGG GGAGCGCGGC CCGCCGGGCT GGCAGCGCCG GGCGCTGGTG
CTGCTGGTCT GGGCGCTGGT GCTGCTCGGC GGCGCGCTGC AGATCGCGCG CACGCAGTTC
AGCGCCGACC TTTCCGCCTT CCTGCCCAAG AGCCCCGACG CGCGGCAGCA GGTGCTCATC
GAGCAGCTGC AAAGCGGCGT GGCCTCGCGC ACGCTGATGC TCGGCATCGA GGGCGGCGCG
AGTGCCGAGC AGCGCGCGGC CGTATCGCGC GCCGTGGCCA AGTCCATGCG CGAGAGCCGG
CTCTTCGACC TGATCCAGAA CGGCGACACC GGCGACTGGA GCGAGGCCGG CACCTGGGTC
TTCGCGCACC GCTACCAGCT TTCGCCGGGC GTCCGGCCCG AGCATTTCAC CGCCGAAGGC
CTGCGCGACG CGATCTACGA AACGCTGTCG ATGCTCGGCA CGCCGGCCGG CAACGCGATC
AAGCCCTTGC TCGACCGCGA TCCCACCGGC GAGACCCAGC GCATTGCCGT CGAGCTGACG
CCGGCCAGCG CGCCGCGCAG CGAAGACGGC GTCTGGATGT CGCGCAGCGC GCCGCGGGCG
CTCATGATCG TCACCACGCG CGCGGCGGGC AGCGATCTCG ACGCCCAGGC GCAAACCATT
GCAAGCGTGC ACGCGGCCTT CGATGCCGCC ACGCGCGGCA TGGAAGAGGC CACCCGGCCG
AAGCTGCTGC TGAGCGGCCC GCCCGTGTTC TCGGTGCTGA GCCGCGACAA GATCAAGACC
GAAGCGATCC ACCTCGCGAT CGTGGGCGGC ATCGTGATGG GCGGCCTGCT GCTGCTGGCC
TTCGCGTCGC CGCGCGCGCT GGTCATCGCG TTCCTGCCCG TGGCCACCGG CGTGGTGGTG
GGGACCGCGG CGGTCAGCGT GGTGTTCGGC TCGGTGCACG GCATGACGCT GGGCTTCGGC
AGCACGCTGA TCGGCGAGAC CGTCGACTAC GCCATCTACT ACCTGATCCA GGCGCGCGGC
GCGGCCGTGG CCGGCACCGG CTGGGCGCGC TGGCGCGATG TGCACTGGCC CACCGTGCGG
CTCGGGCTGC TGACCTCGGT GTGCGGCTTC GCGGCGCTGG TGTTCTCGGG ATTCCCGGGC
CTGGCGCAGC TGGGCGTGTT CTCCATCGCA GGGCTCGTGG CCGCGGCGCT GGCCACGCGC
TACGCATTGC CCATGCTCGC GCCCGATGGC GCCACCGGCA TGGGCATGCG CCGCTACATG
GCGCGCGCGG CCGGCGTGCT CGTGCGCGGC CTGCCGCACC TGCGCTGGAT GCTTGCGGGG
CTCGGCGTGG CTGCGCTGGT GCTGGTCATC TGGCAGGGCG GCCATCTGTG GCGCGCCGAC
CTCGGCGCCA TGAGCCCGGT GCCCAAGTCG GCCCAGCAGC TCGACGAGAT GCTGCGCGCC
GACATCGGCA CCGGCGACGG CGGCACGCTG GTGGTGGTGT ACGGCGCCGA TGAAGAAACC
GCACTGCGCA ACACCGAAGC CGCCACCGCG CGGCTCGAAG CCCTGGTCGA CAAGGGCGAG
CTCGGCGGCT TCGAGGCCGT GACGCGCGTG CTGCCGAGCA TCGCGACGCA GTCGGCCCGG
CTCGCGAGCC TGCCCGACGG CGAGACGCTG CGCAGCCGGC TGGCCGAAGC CACCCAAGGC
TCGCCGCTGC CGGCCTCGCG CCTCGGCCCT TTCCTGGCCG ATGTCGAAGC CGCGCGCAAG
CTCGCGCCCG TGCGGCGCGC CGACCTGGCG GGCGGGCCGC TCGGCTCGGT CGTCAACACG
CTCATGTACC AGCGCCCGGG CGGCGGCTGG TCGACGCTGG TGGTGCTGCA CCCCGGGGCA
AAGTTCGACG CGCGCCGGCT CGAAGCGGCG CTGGCGGGCG TGCCCGAGGT GCAGGTGGTC
GACGTGGGCC GCGAACTCGC GGGGCTCTAT CAGCGCTACC TGCACGAGGC CTTCGTGCAG
GTGCTGCTCG GCGCGCTGGC GGTGGTGGTG CTGTTGGGCA TCTACCTGCG CTCGGGCCGG
CGGCTGCTCG CGGTGTGCCA GCCGCTGCTG TTCGCGGTGG TGCTCACGCT GGGCGGCATG
GCCGTGCTCC AGGTGCCGCT GGGCATCCTG CACCTGGTGG GGCTGCTGCT GATCGTGGCG
GTGGGCTCCA ACTACGCGTT GTTCTTCGAC CAGCTGCGCG TGGCCGGGCG GGCCGACGAG
GACACGCTGG CGTCGCTGAT GCTGGCCAAC CTCACCACGG TGGTGTCTTT CGGGCTGATC
GCGATCTCGG ACATTCCGGC GCTGTCGTCG ATCGGCCGCG TGGTGGCGCC GGGCGCCTTG
CTGGCGCTGC TGCTGTCGGC CGCGTTTGCG CGCCGCGTGG CGCCCACGCC GCCCGCCGCG
CGCGGCTGA
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| Protein sequence | MKERETGERG PPGWQRRALV LLVWALVLLG GALQIARTQF SADLSAFLPK SPDARQQVLI
EQLQSGVASR TLMLGIEGGA SAEQRAAVSR AVAKSMRESR LFDLIQNGDT GDWSEAGTWV
FAHRYQLSPG VRPEHFTAEG LRDAIYETLS MLGTPAGNAI KPLLDRDPTG ETQRIAVELT
PASAPRSEDG VWMSRSAPRA LMIVTTRAAG SDLDAQAQTI ASVHAAFDAA TRGMEEATRP
KLLLSGPPVF SVLSRDKIKT EAIHLAIVGG IVMGGLLLLA FASPRALVIA FLPVATGVVV
GTAAVSVVFG SVHGMTLGFG STLIGETVDY AIYYLIQARG AAVAGTGWAR WRDVHWPTVR
LGLLTSVCGF AALVFSGFPG LAQLGVFSIA GLVAAALATR YALPMLAPDG ATGMGMRRYM
ARAAGVLVRG LPHLRWMLAG LGVAALVLVI WQGGHLWRAD LGAMSPVPKS AQQLDEMLRA
DIGTGDGGTL VVVYGADEET ALRNTEAATA RLEALVDKGE LGGFEAVTRV LPSIATQSAR
LASLPDGETL RSRLAEATQG SPLPASRLGP FLADVEAARK LAPVRRADLA GGPLGSVVNT
LMYQRPGGGW STLVVLHPGA KFDARRLEAA LAGVPEVQVV DVGRELAGLY QRYLHEAFVQ
VLLGALAVVV LLGIYLRSGR RLLAVCQPLL FAVVLTLGGM AVLQVPLGIL HLVGLLLIVA
VGSNYALFFD QLRVAGRADE DTLASLMLAN LTTVVSFGLI AISDIPALSS IGRVVAPGAL
LALLLSAAFA RRVAPTPPAA RG
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