| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2656 |
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| Symbol | |
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| ID | 7972418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2799809 |
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| End bp | 2800732 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793244 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002944547 |
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| Protein GI | 239815637 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.519429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACC TGCTCGACAT CCTGACCAAT CCGGCGTTCT GGGTCGCGGT GCTGCGCATC
GCCACGCCGC TGATCCTCGG CACGCTGGGC GTGCTGCTGT GCGAGCGCGC GGGCGTGCTC
AACCTCGGCA TCGAGGGAAT CATGGTCGCG GGCGCCTTCA CCGGCTGGCT CGCGGTGTAT
GCGGGCGCGC CGCTCTGGGC CGGAGTGGGC GTCGCCGCGC TCACGGGCAT GGTGTTCGGG
CTGCTGCATG CCTTTCTCAC GGTGGGCCTG GCGCTGTCGC AGCACGTCTC GGGGCTGGGC
ATCACGCTGC TGGCCACGGC GCTCAGCTAC TTCGGCTACC GCGTGAGCTT TCCGAAGGTG
AACACGCCGC CGACCATCGC GCCCTTCGCG CCGATGGAGT GGCTGCCGGT GCCCATCCTC
AATGCGCAGA CCGCGCTCAC GCTGTTCGCG CTGCTGCTGG TGCCGGCGAT CGCCTGGGTG
CTGTACCGCA CGCCGCTCGG GCTCGCCGTG CGCATGGTGG GCGAGAACCC GCAGGCCGCC
GAGAGCCAGG GCGTGTCGGT CGCGGCCACG CGCACCGGCG CCATTGTGGC GGGCTCGGCG
CTGATGGGCG TGGCCGGCGC CTTCCTCACG CTCTCGGCCT TCAACGCCTT CTTCTTCAAC
ATGGTGAACG GCCGCGGCTG GATCTGCGTG GCGCTGGTGG TGTTCGCCTC TTGGCGGCCG
GGCAAGGCCC TGCTCGGCGC GCTGCTGTTC GCGTTCTTCG ATGCGCTGCA GCTGCGGCTG
CAACAATCGG GCGATGCCGT GCTGCCCTAC CACATCTACC TGATGCTGCC GTACCTGCTC
TCGATCCTCG CGCTGGTGCT GGTGGCGCGC AAGGCCAGCT ATCCGCAGGC GCTGATGAAG
CCCTATCGCA AGGGGGAGCG TTGA
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| Protein sequence | MTDLLDILTN PAFWVAVLRI ATPLILGTLG VLLCERAGVL NLGIEGIMVA GAFTGWLAVY
AGAPLWAGVG VAALTGMVFG LLHAFLTVGL ALSQHVSGLG ITLLATALSY FGYRVSFPKV
NTPPTIAPFA PMEWLPVPIL NAQTALTLFA LLLVPAIAWV LYRTPLGLAV RMVGENPQAA
ESQGVSVAAT RTGAIVAGSA LMGVAGAFLT LSAFNAFFFN MVNGRGWICV ALVVFASWRP
GKALLGALLF AFFDALQLRL QQSGDAVLPY HIYLMLPYLL SILALVLVAR KASYPQALMK
PYRKGER
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